Gene Information

Name : lolD2 (VAPA_1c23860)
Accession : YP_008516161.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Virulence
Product : putative lipoprotein-releasing system, ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2546122 - 2546844 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
ATGTCCCAACCCCCGTCTGATGCCATTGTCGCTGTCGAGCATGTGTTCAAGTCGGTGACCGACTCGACCGGTACGCTCGA
CATTTTGCAGAACATCGATTTCACCCTGGGCGCGCGGGAAACCGCCGCCATCGTCGGTGCCTCGGGTTCGGGCAAGAGCA
CCTTGCTGTCGATCATCGCCGGGCTCGACACGCCCACGCGCGGCACCGTCAGGCTCGCGGGCGATGACATCTTCGCCATC
GACGAGGACGAGCGCGCCGCGCTGCGTGCCCAGCGCGTGGGCTTCGTGTTCCAGAGTTTCCAGCTGCTGGGCAACCTGAG
CGCGCTCGAGAACGTGATGCTGCCGCTCGAACTGGCCGACCGCAAGGACGCGCGCAAGGCCGCCACCGAGATGCTCGGGC
GCGTCGGACTCGGGCAGCGCCTCGGCCACTATCCCAAGGTGCTCTCGGGCGGCGAGCAGCAGCGCGTGGCGCTGGCCAGG
GCCTTCGTGGTGCAGCCGGCGCTGCTGCTGGCCGACGAACCCACCGGCAGCCTCGATTTCGCGACCGGCGAACAGGTCAT
GCGGCTGATGTTCGACCTCAACCGCGAGCTCGGCACCACGCTCGTGCTCGTCACCCATGACCGCGGCATTGCAGCCCAGT
GCGAGCGCCGCATCACCATCGAGGCCGGGCGCATGGCGCTCAACGAGTCGACGCCTGTCCTGGTGGCCTCGCTGGAAGCA
TGA

Protein sequence : 
MSQPPSDAIVAVEHVFKSVTDSTGTLDILQNIDFTLGARETAAIVGASGSGKSTLLSIIAGLDTPTRGTVRLAGDDIFAI
DEDERAALRAQRVGFVFQSFQLLGNLSALENVMLPLELADRKDARKAATEMLGRVGLGQRLGHYPKVLSGGEQQRVALAR
AFVVQPALLLADEPTGSLDFATGEQVMRLMFDLNRELGTTLVLVTHDRGIAAQCERRITIEAGRMALNESTPVLVASLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-25 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD2 YP_008516161.1 putative lipoprotein-releasing system, ATP-binding protein LolD NC_012469.1.7686878. Protein 2e-40 47
lolD2 YP_008516161.1 putative lipoprotein-releasing system, ATP-binding protein LolD NC_008702.1.4606598. Protein 2e-32 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD2 YP_008516161.1 putative lipoprotein-releasing system, ATP-binding protein LolD VFG2059 Protein 4e-15 45