Gene Information

Name : kdsD (VAPA_1c20690)
Accession : YP_008515846.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Virulence
Product : arabinose 5-phosphate isomerase KdsD
Function : -
COG functional category : -
COG ID : -
EC number : 5.3.1.13
Position : 2189277 - 2190227 bp
Length : 951 bp
Strand : +
Note : -

DNA sequence : 
ATGAACACAGTCGCAACATCCGCCATGGACTACCGCGCTTCTGCCAAGCGAGTTTTCCAGGTCGAGGCCGAGGCAGTTGC
CGAACTCGCAGGCAAGCTCGATGGTGATTTTTCTCTGGTGGTGGAGCACATCCTGCAGTCCAGCGGCCGCACCATCGTCT
GTGGCATGGGGAAGTCGGGCATCATCGGAAAGAAGATCGCAGCCACACTGGCAAGCACCGGCACACCCAGCTTTTTCATG
CATCCTGGTGAGGCGTACCACGGCGACCTGGGCATGGTGACTTCTGCGGATGCCTTTCTTGCCATCTCCTTTTCCGGGGA
GACCGAGGAGGTGGTCAAGTTGCTGCCTTTCCTGAAGGACAACGGCAATTTCCTGGTGGCGATCACAGGCAATCCGAACT
CTACGTTGGCGCGCGCGGCCGACTGTCATTTGAATGTGGGCGTGAAGGCTGAGGCCTGTCCGCTGCACTTGGCGCCAACT
GCCTCGACCACGGCGACGTTGGCGATGGGCGATGCATTGGCGGTGACGCTGATGGAAGCGCGTGATTTCAGGCCAGAACA
TTTCGCCCGCTTTCACCCTGGGGGTTCGCTAGGGCGGCGTCTGCTGAGTCGCGTCGGACATGAAATGACGAGTGCGAACC
TGGCCATTATTGGCGAAGACGCACAGATCATGGATGTCATCAGTGCGATTACACGTTCCAGCCTAGGACTGGCCATCGTC
AAGGTCGACAGCGAGTGGGCCGTAATCACCGATGGCGACGTGCGGCGTGCGGTCGCGCGCTATGGCAAAGACGTTTTCGA
TCGTCGCGCATCTGATGTGATGACGCGCAGCCCGGTGCGTGTGGCGGCGGAGACGCGAGTGGAAGATGCTATTGCGCTGA
TGGAACGCCACCGCATTTCTTCGCTGCTGGTATTCGACAAAGAGACGCTGGTTGGCGTTTTCAAGAAGTAG

Protein sequence : 
MNTVATSAMDYRASAKRVFQVEAEAVAELAGKLDGDFSLVVEHILQSSGRTIVCGMGKSGIIGKKIAATLASTGTPSFFM
HPGEAYHGDLGMVTSADAFLAISFSGETEEVVKLLPFLKDNGNFLVAITGNPNSTLARAADCHLNVGVKAEACPLHLAPT
ASTTATLAMGDALAVTLMEARDFRPEHFARFHPGGSLGRRLLSRVGHEMTSANLAIIGEDAQIMDVISAITRSSLGLAIV
KVDSEWAVITDGDVRRAVARYGKDVFDRRASDVMTRSPVRVAAETRVEDAIALMERHRISSLLVFDKETLVGVFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 4e-49 46
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 1e-48 45
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 2e-48 45