Gene Information

Name : VAPA_1c19960 (VAPA_1c19960)
Accession : YP_008515773.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Unknown
Product : putative FAD-dependent oxidoreductase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2112951 - 2114000 bp
Length : 1050 bp
Strand : +
Note : -

DNA sequence :
ATGACCTACGACGTGATCATCATCGGCGGTGGCCAGGCGGCGCTCTCGGTGGCGTACTTCCTGCGACGTACGCAACGCTC
GTTCCTGATTCTGGACGCCGAAGAACGCGGCGGCGGCGCCTGGCAGCACGGATGGGATTCATTGCGTCTGTTTTCACCGG
CGGCTTGGAGTTCGATCGCGGGGTGGCCAATGCCGAGCGCAGGTACAACCTATCCCGGTCGCGACCATGTGGTGAATTAC
CTGCGGGACTACGAAAAGCGCTACGCACTCCCGATCGAGCGGCCGGTATTCGTATCCTCGATCACGCGCGATGCGCGGGG
CTTCAGCGTGCAGGCCGCCGGCAGGACCTGGACGGCGCGAACGGTCGTCAGCGCAACGGGCACTTGGCGCAAACCTTTCA
TGCCCGTCTATCCGGGCATGCAGGATTTCGCCGGCCGCCAGCTCCACTCGGCGCACTACCGGAGTCCGGACGAATTCAGG
GGCCAGCGGATCATGATCGTGGGCGGTGGAAACTCCGGTGCGCAGATCCTGGCCGAAGTGTCGCTCTCGGCAGACGAGAC
CGTGTGGGTCACGGAAGACGAGCCCACCTTTCTGCCAGATGACGTGGACGGCCGTGTGCTGTTCGAGCGTGCGACGGCGC
GATGGCGTGCGCTGCAGGAAGGGCGAAGCATCGATGCGCTTCCTGGCGGATTCGGCGACATCGTCATGGTGCCGCCGGTG
ATGGACGCCCGTGCACGCGGGGTGCTGTCGTCCGTCAGACCTTTCCGTCGGATGACGTCCGAAGGCGCACTCTGGGACGA
CGGCACCGTTCGCGAATTCGATGCGGTGATCTGGTGCACAGGCTTTCGCGCGGCGTTGGACCATCTCATACCGCTCGACG
CTGTCGAAGACGGAAGGGTCCCTGTCACCGGGACTTGCTCGCGAGATGTACCCGGACTCTGGCTGGTGGGCTATGGAGAA
TGGACCGGGCCGGCGTCGGCAACGCTCATCGGGGTGATGCGCACCGCAAGAAGCACAGCGGCCGAGGTCGACGAGTCCCT
AAGAAGCTGA

Protein sequence :
MTYDVIIIGGGQAALSVAYFLRRTQRSFLILDAEERGGGAWQHGWDSLRLFSPAAWSSIAGWPMPSAGTTYPGRDHVVNY
LRDYEKRYALPIERPVFVSSITRDARGFSVQAAGRTWTARTVVSATGTWRKPFMPVYPGMQDFAGRQLHSAHYRSPDEFR
GQRIMIVGGGNSGAQILAEVSLSADETVWVTEDEPTFLPDDVDGRVLFERATARWRALQEGRSIDALPGGFGDIVMVPPV
MDARARGVLSSVRPFRRMTSEGALWDDGTVREFDAVIWCTGFRAALDHLIPLDAVEDGRVPVTGTCSRDVPGLWLVGYGE
WTGPASATLIGVMRTARSTAAEVDESLRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trkA CAJ77013.1 putative monooxygenase Not tested AbaR1 Protein 5e-92 56
trkA AFC76430.1 TrkA Not tested AbaR5 Protein 8e-92 56
trkA ADZ05764.1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase Not tested AbaR11 Protein 4e-88 55