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Name : lysS (VAPA_1c15030) Accession : YP_008515288.1 Strain : Genome accession: NC_022247 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase LysS Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1638051 - 1639613 bp Length : 1563 bp Strand : - Note : - DNA sequence : ATGTCCGACCACCTGATCCCCTCCATTCCCACGCCCGCCGCGGCTCCAGCCCCCGCGCCCGCCGTCGACGACAACCAGCT CATCGCGGAACGCCGCGAAAAGCTCAAGCTGATGCGCGCCGCGCAGGCCGAGGGCAAGGGTGTCGCATTTCCGAACGACT TCAAGCCGGGCCATCGCGCCGCCGCGCTGATCGAGATGCATGGCGCCGTCGATGCCGAAGCCCTCGAGGCGCAAGCCATT TCCGTGAGCGTGGCCGGCCGCATGATGCTCAAGCGCGTGATGGGCAAGGCCAGTTTTGCAACGGTGCAGGATGCGACCAG CCGCATCCAGCTCTACGTCACGCGCGATGCCATCGGCGAGGAAGCCTATGCCGAGTTCAAGCGCTGGGACCTCGGCGACA TCGTGGGTGCCGAAGGCATGCTGATGAAGACCAAGACCGGCGAGCTGTCGGTCAAGGTCACGAAGCTGCGCCTGCTCACC AAGAGCCTGCGCCCGCTGCCCGACAAGTTCCACGGCATGGCCGACCAGGAGCAGAAATACCGCCAGCGCTACGTCGACCT GATCACCGACGAAACCGCCCGCGTGCGCTTCACCGCGCGCAGCAAGGCCGTGAGTGCACTGCGCGAGTTCATGGTGGCCC ACGACTTCCTCGAAGTCGAAACGCCGATGCTGCACCCCATTCCCGGCGGCGCGAATGCCAAGCCCTTCAAGACGCACCAC AACGCGCTCGACCAGGAGATGTTCCTGCGCATCGCGCCCGAGCTCTACCTCAAGCGCCTGATCGTCGGCGGCTTCGAGCG CGTGTTCGAAATCAACCGGAGCTACCGCAACGAGGGCATCTCGGTGCGGCACAACCCCGAGTTCACGATGATGGAGTTCT ACGCGGCCTACTGGAACTACCGCGACCTGATGGACTTCACCGAAACGCTGATCCGCACCATCGCCGACAAGGCCGTGGGC ACGCAGCAGCTCACCTACCAGGGCAAGCCGGTCGACCTGACCCAGCCTTTCGAGCGCCTGACGATCCGCGAAGCCATCCT CAAGTACGCCGAGGCCGGCACCGGTGTCGACGACAGCGCCTGGCTCATCAATGCGCTGCGCAAGCTCGGGCTGAGCGAAG AGAAGGACAAGCTCTCGCAGCGCAGCCTGGCCAGCCTGCAGGTGATGTACTTCGAAGAGACGGTGGAAGAGAAGCTCTGG CAGCCGACCTTCATCATGGAGCACCCGACCGAGATCTCGCCGCTGGCGCGCGCCAACGACGAGCGGCCCGAGGTCACCGA GCGCTTCGAGCTCTACATCACGGGCCGCGAATTCGGCAACGGCTTCAGCGAGCTCAACGATGCCGAGGACCAGGCCGCGC GCTTCAACGCCCAGGTGGCCGCCAAGGACAGCGGCGACGACGAAGCCATGTTCTACGACCACGACTTCGTGCGCGCACTC GAATACGGCATGCCGCCCACCGGTGGCTGCGGCATCGGCATCGACCGGCTGATGATGCTGCTGACCGATTCGCCGAGCAT CCGCGACGTGATCCTGTTCCCGGCGCTGCGCAGGGAATCTTGA Protein sequence : MSDHLIPSIPTPAAAPAPAPAVDDNQLIAERREKLKLMRAAQAEGKGVAFPNDFKPGHRAAALIEMHGAVDAEALEAQAI SVSVAGRMMLKRVMGKASFATVQDATSRIQLYVTRDAIGEEAYAEFKRWDLGDIVGAEGMLMKTKTGELSVKVTKLRLLT KSLRPLPDKFHGMADQEQKYRQRYVDLITDETARVRFTARSKAVSALREFMVAHDFLEVETPMLHPIPGGANAKPFKTHH NALDQEMFLRIAPELYLKRLIVGGFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTETLIRTIADKAVG TQQLTYQGKPVDLTQPFERLTIREAILKYAEAGTGVDDSAWLINALRKLGLSEEKDKLSQRSLASLQVMYFEETVEEKLW QPTFIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELNDAEDQAARFNAQVAAKDSGDDEAMFYDHDFVRAL EYGMPPTGGCGIGIDRLMMLLTDSPSIRDVILFPALRRES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-136 | 56 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 7e-77 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008515288.1 | lysine--tRNA ligase LysS | VFG1668 | Protein | 1e-136 | 56 |
