Gene Information

Name : lolD1 (VAPA_1c12710)
Accession : YP_008515059.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Virulence
Product : lipoprotein-releasing system, ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 1392610 - 1393278 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
GTGGTGCTGAAGGCGCGCGGCCTCACCAAGCGCTTTCACGAAGGGCGCATCGACCTCACGGTGCTGCACGGCGTCGACCT
GGACGTGCGCGCCGGAGAAACGCTGGCCATCGTCGGCGCCTCGGGCTCGGGCAAGAGCACGCTGCTGCACCTGATGGGCG
GGCTCGATGCGCCCACGGCCGGCAAGGTCGAGCTGCTCGGCAAGGACATCGCGCATGCCGATGCGGCCGAGCAAGGGCGG
CTGCGCAACCGGCACCTGGGCTTCGTCTACCAGTTCCATCACCTGCTGCCCGAATTCAGCGCGCTCGACAACGTGGCGAT
GCCGCTCAAGATCCGGCGCATGGACTCCGCACAGGCGGCGGCCGCGGCCACGAAGATCCTCGAAAGCGTGGGCCTGGGCG
AGCGCCTGCATCACCGGCCGGCCGAGCTCTCGGGCGGCGAACGCCAGCGCGTGGCCATTGCGCGTGCGCTGGTCACGCAG
CCGGCCTGCGTGCTGGCCGACGAGCCCACGGGCAACCTCGACCGCAACACGGCCGACACGGTGTTCGCGCTGATGATCGA
GCTCGCCCACAAGCACCGCACGGCATTCGTGATGGTCACGCATGACCAGGAGCTCGCGAAGCGCTGCGACCGCGTGCTGC
AACTGGTGGCGGGGCGATTGGCGGGCTGA

Protein sequence : 
MVLKARGLTKRFHEGRIDLTVLHGVDLDVRAGETLAIVGASGSGKSTLLHLMGGLDAPTAGKVELLGKDIAHADAAEQGR
LRNRHLGFVYQFHHLLPEFSALDNVAMPLKIRRMDSAQAAAAATKILESVGLGERLHHRPAELSGGERQRVAIARALVTQ
PACVLADEPTGNLDRNTADTVFALMIELAHKHRTAFVMVTHDQELAKRCDRVLQLVAGRLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD1 YP_008515059.1 lipoprotein-releasing system, ATP-binding protein LolD NC_008702.1.4606598. Protein 9e-33 46
lolD1 YP_008515059.1 lipoprotein-releasing system, ATP-binding protein LolD NC_012469.1.7686878. Protein 2e-37 43