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Name : VAPA_1c11260 (VAPA_1c11260) Accession : YP_008514917.1 Strain : Genome accession: NC_022247 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 1240948 - 1242339 bp Length : 1392 bp Strand : - Note : - DNA sequence : ATGCGCCACCCCCTGCCCTACGCGTTCGCACGCAGCCAGCAGCTGCTGCTCGAAGAAGCCGACGACGGCAGCCACACGCT GTGGATGTCGAGCCATCCCGCGCGCAGCGCGGTCGGCGAGGTCACGCGCAAGTACGGCGTGCAGGCCTTCGAGGTGCTGG CCGACGGCCCGCTCGCGCAGCGCATCAGCGCGGCCTATGCGCAGGGCGAGTCGAGCGCCGCCGCGGTGGTGAGCGAGGTG CAGAGCGACGCCGATCTCTCGCGCATGATGCAGGAGCTGCCAGCGGTCGAGGACCTGCTGGAAAGTGCCGGCGACGCGCC CATCATCCGCATGCTCAACGCGCTGCTCACGCAGGCCGCGCGCGATGGCGCGAGCGACATCCACATCGAACCCTACGAGC GCACCTCGTCCGTGCGCTTTCGCATCGACGGCACGCTGCGCGAGGTGGTGCAGCCCAACCGCGCGCTGCATGCCGCGCTG ATCTCGCGCCTGAAGATCATGGCCGACCTCGACATCTCCGAGAAGCGGCTGCCGCAGGACGGGCGCATCAGCCTTCGCAT CGGCACGCGCGCGGTCGACGTGCGCGTCTCCACGCTGCCCAGCGCGCACGGAGAGCGCGCGGTGCTGCGCCTTTTGGACA AGACCGAATCCAAGCTCACGCTCGAATCGGTCGGCATGCAGGGCGACACGCTGGAGCGCTTCGAGCGCCTCATCGCGCAG CCGCACGGCATCATCCTGGTGACCGGCCCCACGGGCTCGGGCAAGACCACCACGCTGTACGCCGCGCTGGCCCGGCTGGA CGCGAGCCGCAGCAACATCATGACGGTGGAAGACCCCATCGAATACGAGTTGCCGGGCGTGGGCCAGACGCAGATCAACG CCAAGATCGAGCTCACCTTCGCGAAGGCGCTGCGCGCCATCCTGCGGCAGGACCCGGACGTGATCATGATCGGCGAGATC CGCGACTTCGAGACCGCGCAGATCGCCATCCAGGCCTCGCTCACCGGCCACCTGGTGCTTGCGACGCTGCACACCAACGA CTCGGTCAGCGCCGTCACGCGCCTGACCGATATGGGCGTGGAGCCCTTCCTGCTGAGCTCGTCGCTCCTGGGCGTGCTCG CGCAGCGCCTGGTGCGCAAGGTCTGCACGGCCTGCGCCGGCGCCGGATGCGAGGTGTGCGGGCAAACCGGCTACCAGGGG CGCACCGGCATCTTCGAGCTGCTGGTGGCCAATGACGAAGTGCAGGCGCTGATCCACGGCAAGGCCGCCGAGAGCCAGCT CTTCGAAGCCGGCGCACGCGGCGGCCTGCGCTCGATGCGCGAGGACGGCGAACGGCTGGTGCAGGCCGGCATCACCTCGC GCGCCGAGCTGGTGCGGGTCACGCGCGAATAG Protein sequence : MRHPLPYAFARSQQLLLEEADDGSHTLWMSSHPARSAVGEVTRKYGVQAFEVLADGPLAQRISAAYAQGESSAAAVVSEV QSDADLSRMMQELPAVEDLLESAGDAPIIRMLNALLTQAARDGASDIHIEPYERTSSVRFRIDGTLREVVQPNRALHAAL ISRLKIMADLDISEKRLPQDGRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKTESKLTLESVGMQGDTLERFERLIAQ PHGIILVTGPTGSGKTTTLYAALARLDASRSNIMTVEDPIEYELPGVGQTQINAKIELTFAKALRAILRQDPDVIMIGEI RDFETAQIAIQASLTGHLVLATLHTNDSVSAVTRLTDMGVEPFLLSSSLLGVLAQRLVRKVCTACAGAGCEVCGQTGYQG RTGIFELLVANDEVQALIHGKAAESQLFEAGARGGLRSMREDGERLVQAGITSRAELVRVTRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-102 | 56 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-102 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VAPA_1c11260 | YP_008514917.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-101 | 55 |
| VAPA_1c11260 | YP_008514917.1 | general secretion pathway protein E | VFG1876 | Protein | 6e-109 | 51 |
| VAPA_1c11260 | YP_008514917.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-111 | 51 |
| VAPA_1c11260 | YP_008514917.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-68 | 45 |
| VAPA_1c11260 | YP_008514917.1 | general secretion pathway protein E | VFG0233 | Protein | 2e-77 | 43 |
