Gene Information

Name : pdp (SIR_0852)
Accession : YP_008512788.1
Strain : Streptococcus intermedius B196
Genome accession: NC_022246
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : 2.4.2.2
Position : 867170 - 868447 bp
Length : 1278 bp
Strand : -
Note : -

DNA sequence :
ATGAGAACAGTTGATGTGATTCAGAAAAAGCGGGATGGTCTAGAATTAACCAGTGATGAAATCAAGTGGTTAATTGAGGG
GTATGTTGCTGGAACTGTACCAGACTATCAAATGGCAGCTTTTGCAATGGCGGTATATTTTAAAGGCATGAGCACTCGCG
AGATTTCTGATTTGACGATGACTATGGTAGGAACAGGCCAGCAAATTGATTTGTCAGCTATTTCTGGAGTCAAGGTTGAT
AAACATTCAACCGGAGGCGTGGGTGATAAAGTGACACTTGTCTTAGTGCCCTTAGTAGCCAGTTTTGGAGTGCCTGTTGC
TAAAATGAGCGGTCGTGGACTTGGTCATACAGGAGGCACGCTTGATAAATTAGAATCCATTAAAGGATTTCAGATTGAGC
GTAGTCAAGAAGAATTTATTGAGCAAGTGCAAAATATCGGACTGTCTGTTATTGGTCAGTCGGATCAGTTGGTGAAAGCT
GATAAATTACTTTATGCTTTGCGTGATGTGACGGCGACCGTCGATACGATCCCTCTAATTGCAAGTTCTGTTATGAGTAA
GAAGATCGCGGCTGGGGCAGATAGTATTTTGCTAGATGTGACAGTTGGCGAGGGTGCATTTATGAAAAATCTAGAAGATG
CGCGTGCTCTAGCACGGACTATGGTTGATTTAGGAAAGGCAGTTGGGCGTAGGACGACAGCAGTTATTACTGATATGAGC
CAACCTCTGGGAACTAGCATTGGTAATCGTTTGGAAATCCTTGAAGCTTTGGATATCTTGCAGGGAAAAGGACGAGAAGA
TGTAACAGAATTTATTTGTGAATTAGGCCAAATTATGCTCGGCTTAGCAAATGTTGAAAAAACTGTAAAAGAAGTGCGAG
AACATCTATTTGATGGATCAGCACTGCAAAAATTTGAAGCCATGGTTGTTGCACAAGGTGGTGATTTAGAAGATTTGTAT
CGTTCTTCATCAGCAAAATACGTTGTAGAAGTAACTGCAGATGAAGTAGGTTATATTTCTGAATTGCCAGCTATGGAATT
TGGTTTATTCGCTATGCGGCTAGGTGCGGGTCGAGCTGTGAAAACGGATGTATTAGACTTTGAAACAGGAATTGTTTTTG
AAAAGAAAGTTGGAGAACCAGTCAAAATCGGTGAAATTGTCGCAAAAATTTATGCAAATGAAAAAATTTCACAAGAATTA
GTTACAGAATTCAAAAAAAATGTTAAAATAAGTAATGAGCCGAAAAAAGTACGAGAGATTATCGAAGTAATCGCTTAA

Protein sequence :
MRTVDVIQKKRDGLELTSDEIKWLIEGYVAGTVPDYQMAAFAMAVYFKGMSTREISDLTMTMVGTGQQIDLSAISGVKVD
KHSTGGVGDKVTLVLVPLVASFGVPVAKMSGRGLGHTGGTLDKLESIKGFQIERSQEEFIEQVQNIGLSVIGQSDQLVKA
DKLLYALRDVTATVDTIPLIASSVMSKKIAAGADSILLDVTVGEGAFMKNLEDARALARTMVDLGKAVGRRTTAVITDMS
QPLGTSIGNRLEILEALDILQGKGREDVTEFICELGQIMLGLANVEKTVKEVREHLFDGSALQKFEAMVVAQGGDLEDLY
RSSSAKYVVEVTADEVGYISELPAMEFGLFAMRLGAGRAVKTDVLDFETGIVFEKKVGEPVKIGEIVAKIYANEKISQEL
VTEFKKNVKISNEPKKVREIIEVIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 2e-90 48