|
Name : SIR_1783 (SIR_1783) Accession : YP_008513685.1 Strain : Streptococcus intermedius B196 Genome accession: NC_022246 Putative virulence/resistance : Virulence Product : extracellular polysaccharide biosynthesis Function : - COG functional category : - COG ID : - EC number : 4.2.1.46 Position : 1865777 - 1867585 bp Length : 1809 bp Strand : - Note : - DNA sequence : ATGGAATTAACGAGAGCACAAAAACGAGTTATCTTGATGATAGTGGATGCCGCTTTACTATATATAAGTGGTTATATAGC TTATTTTTTCTTGTCTGAGTATATAGAGACATCAAATGATATGCTGTTTAAAACACTCTCTTCCATTGTCGTAATTTACC TTCTTTTAGGTTTAATCACACGTGTATTTTCAATTATTAATCGTTACACAGATTATAAGACGTTAAGTAAAATTTCTCTT ATTCTACTGGGAACTTATCTCATTACAGCTCTAGTGGAATTGTTTTTATCCATAACCATTAGTTATCGTTTTCTTTTGCT TAGTTGCATGTTTTCTATTCTATTTACGATATCAATCAGATTAGCTTGGAGAATGTGGCATAGCTTAAAGAATGGAGTGA ATTACGAAGAAGTTACAAATTTAAATGTTCATAGGACATTAGTGGTCGGCGCGGGAGACGGAGGAAATCTTTTTATTACT ACTGCGCTAAAAGACTCGCCAGATTTGAAAATCGTTGCGATTGTCGATAAAGATGTAAAAAAACAAGGTTCTTTTTTACA TGGTGTTAAAGTTGTTGGATCTGATGAACAAATCCCAGAAATTGTAGCAAACTATGAAATTAACCAAATTGTTATTGCGA TCCCCTCTTTGAAACCAGAGGAATATGAACATCTTTTAGAACTTTGCAAAAAAACAGCTGCTAAAGTTAGCACTATTCCT AAATATGAAGAAGTTGTTACAGGGAAACTGAGTGTCAGTAAACTACGAGAGATTGATATTGCTGATTTATTAGGGCGCAA AGAAGTAAAACTGGATCAAACAAGTTTAAATTCAAATCTCAAAGGCAAGACCGTATTAGTGACAGGAGCTGGAGGTTCTA TCGGTTCAGAATTATGTCGGCAAATTGCTCGCTTCTTTCCTAAAAGGCTATTACTTTTAGGGCATGGCGAAAATTCTATT TATGTGATACATAAAGAGCTGCTCGCACAATATAAGGATACCATTGAGATTGTTCCAATCATTGCAGATATTCAAGATAG AGAGCGAATTTTTAAACTGATGGAGACTTATCATCCAGATCGTGTTTATCATGCTGCCGCTCATAAACACGTTCCTTTGA TGGAGTATAATCCAACTGAAGCAGTCAAGAACAACATATATGGTACAAAAAATGTAGCGGAAGCCGCTAAAGCAGCTGGA GTTGCTAAGTTTGTTATGATTTCGACAGATAAAGCCGTCAATCCTCCAAATGTTATGGGAGCCACTAAGCGAGTTGCTGA AATGATTGTAACAAGTCTGAATGAAGAAGGGAAAACACTTTTTGCTGCTGTTCGATTCGGAAATGTTTTGGGTAGCCGTG GTAGTGTTGTTCCACTATTTAAAGAACAAATTGCCAAAGGCGGCCCTATCACAGTAACTGATTTTCGTATGACACGTTAC TTTATGACAATACCAGAAGCTAGTCGTTTGGTTATTCAAGCAGGAGCTCTTATGCATGGGGGAGAGATTTTTGTATTAGA TATGGGAGAACCTGTTAAGATTTTGAACTTAGCTAAAAAAATGATAACTCTAAGTGGTCACACTGAAAATGAAATTAAGA TTGTTGAAAGTGGTATTCGCCCTGGTGAAAAATTGTATGAAGTATTACTGTCTTCAGAAGAACGCAAAGCAGAGCAAATC TATGAAAAAATATTTGTTGGAAATGTTCATGCTTTGTCAAAAGAAGAAGTGGATGCTTTTATCTGCTCGATTTCCAATCT TGATGGACAAGAGCTGAAAGAAAAATTGGTGCACTTTGCACAGCAGTAA Protein sequence : MELTRAQKRVILMIVDAALLYISGYIAYFFLSEYIETSNDMLFKTLSSIVVIYLLLGLITRVFSIINRYTDYKTLSKISL ILLGTYLITALVELFLSITISYRFLLLSCMFSILFTISIRLAWRMWHSLKNGVNYEEVTNLNVHRTLVVGAGDGGNLFIT TALKDSPDLKIVAIVDKDVKKQGSFLHGVKVVGSDEQIPEIVANYEINQIVIAIPSLKPEEYEHLLELCKKTAAKVSTIP KYEEVVTGKLSVSKLREIDIADLLGRKEVKLDQTSLNSNLKGKTVLVTGAGGSIGSELCRQIARFFPKRLLLLGHGENSI YVIHKELLAQYKDTIEIVPIIADIQDRERIFKLMETYHPDRVYHAAAHKHVPLMEYNPTEAVKNNIYGTKNVAEAAKAAG VAKFVMISTDKAVNPPNVMGATKRVAEMIVTSLNEEGKTLFAAVRFGNVLGSRGSVVPLFKEQIAKGGPITVTDFRMTRY FMTIPEASRLVIQAGALMHGGEIFVLDMGEPVKILNLAKKMITLSGHTENEIKIVESGIRPGEKLYEVLLSSEERKAEQI YEKIFVGNVHALSKEEVDAFICSISNLDGQELKEKLVHFAQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-105 | 53 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-110 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SIR_1783 | YP_008513685.1 | extracellular polysaccharide biosynthesis | VFG1300 | Protein | 2e-112 | 48 |
