Gene Information

Name : SIR_1329 (SIR_1329)
Accession : YP_008513260.1
Strain : Streptococcus intermedius B196
Genome accession: NC_022246
Putative virulence/resistance : Virulence
Product : conjugal transfer protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1399310 - 1401760 bp
Length : 2451 bp
Strand : -
Note : -

DNA sequence :
TTGAACAGCAAAAGAAAAATTCAGCAGATAAAGTTAGAAAGAAACAAAAAGGCACTAAAAAGGGGGAAACAGGAATTAAA
GCAAGATAAAGTAAAGATGAAAAAAGACAAGACAAATAATGGAAATAGGAAAACATCAGTCTTTGATTTAATCTTAAAGA
AAGAGTCAAAACGATATACGGTGGAAGATACTATTCCCTATCTTAGAATGTTAAAAAGCGGTATATGCCAAACGGATGAA
AGGCACTTTAATAAAAGTATCGTCTTTGGGGACATTAACTATCAGCTTGCCTTAGATGAAGATAGGGACTTGATTTTTAA
TCAGTTTGCCAATTTCTTAAACTCTTTTGATCCAAGTGTTATGATTGAACTTTCATATATTAATCAGCTTGGAAGAAATG
AAGAAATGCAGTCGGCAATACAAATACCGGATAAAAAGGACGGCTTTGACGATATACGATTAGAGTTTAGAGAAATGCTA
AAAAGCCAGATAGTAAAGGGAAATAACGGACTGAAAAAATCAAAGTATGTAACATTTACAGTAGAGGCGGACAATATGGA
GCAGGCAATCTCAAAACTTGAAAGACTTGAGATAGACATCTTATCCAATCTTAAAAATATGGGAGTAAGGGCGGAAAGCC
TTACCGGCGAAGAAAGGTTAAAGATACTTCATGATATATTAAATCCAAGTAAGACATTTTACTTTTCATATAAGGACTTG
CAAAGAAAAGAAAGTACAAAGACATATATTACACCTGATGAGTTTAACTTTACACCAAGCAGATACTTTAAGTTCGGTAA
ATTCATTGGAGCGACAAGCCATTTTCAAATCCTTGCAAGTGAGCTTTCAGACCGTATGCTATCAGAGTTTTTAGACATTG
ATGACAACATCAATATTTCGTTTCACATCAGAGCAATCGAACAAAGTCAAGCCATTAAGATGGTAAAAAGAAAAAACACC
GATATTGATAAGATGCGAATTGAGGAAAATAAAAAGGCGGTAAGATCGGGTTATGATATGGACATCTTACCGTCAGACTT
AATCACCTATGGGGAAGATGTAAAAAGCCTGTTAAAAGACTTGCAGACAAGAGATGAGAGAATGTTTGTTGTAACCATTG
TCTTTATGAATTTTGCAAGGACAATACAAAAACTTGAAAACTCTATTGCACAGATAAGCTCCATTGCCAATAAGCATAAC
TGTAAGATAAAAAGGCTTGACCACACACAGGAACAGGGACTTGTAAGTGTACTTCCTCTTGGAGTAAATAAGCTTGAGAT
TAACAGAGGACTTACTTCCTCATCTACGGCAGTCTTTATGCCCTTTACAACGGAAGAACTTTTCATCAACTCAAGCAACA
GTTTGTATTACGGATTGAATGCCCTCAGTCATAACCTGATTATGGCAGACAGGAAAAGGCTCAAAAATCCGAACGGTTTG
ATACTTGGTACACCGGGTAGCGGTAAGTCATTCTCAGCAAAAAGAGAAATGGCAAATGCTATTATTGTAACGGATGATGA
TGTCATTATCTGCGATCCCGAAGGAGAGTACGGAAACCTTGTAAGACAGTTTGACGGGGAAGTCATTAAAGTAAGCAGTA
AGTCAAAGGACTACCTCAATCCCCTTGATATAAATATGAACTACGGAGATGGGGACGCACCGCTTAAAGACAAGGCAAAC
TTCATAATGAGTATGCTTGAACTTGTAGTTGGCGGTAGCGGACTTACAGCGGAAGAAAAGTCGGTAATAGACAGGTGTTT
GCCTAAGATTTATGAGAAGTATTTTGACAATCCGATAAAAGAAAATATGCCGATACTTCAGGATTTATACGATATGCTTA
AAAATCAGGAAGAAAAGGTCGGTAAGAAACTTGCAACAGAGATGGAGATTTATGTAACAGGCTCTCTTAATGTATTTAAC
CATCAGTCAAATGTGGATTTGAATAAGAAACTGCTTTGTTTTGACATCAAAGAGCTTGGAAGTCAGTTAAAGAAAATAGG
CATGCTTGTGATACAGGATCAGGTGTGGAATAAGGTATCTTTAAACAGAGGAAATAAGGCGACAAGATACTATATAGACG
AGTTCCACCTGCTTTTAAAAGATGAGCAGACCGCCTCCTACTCAGTAGAGATATGGAAGCGTTTCAGGAAATGGGGTGGT
ATTCCGACAGGTATCACGCAGAATGTCAAAGACCTACTCATGAGTAAGGAGATAGAAAATATCTTTGATAATACTGACTT
TGTACTAATGCTTAATCAGGCATCCGGCGATAGAGAAATACTTGCAAGAAAGCTTAAAATCTCAAAACCTCAGCTTAAAT
ATGTTACCAATTCCAATGAGGGCGAGGGACTGCTGTTCTTTGGAAATACCATAGTTCCATTTATCGACAAGTTCCCAAAA
GACACCATTTTATATAAGAAGATGACAACGAAACCTGAAGAAGTGAGGTAG

Protein sequence :
MNSKRKIQQIKLERNKKALKRGKQELKQDKVKMKKDKTNNGNRKTSVFDLILKKESKRYTVEDTIPYLRMLKSGICQTDE
RHFNKSIVFGDINYQLALDEDRDLIFNQFANFLNSFDPSVMIELSYINQLGRNEEMQSAIQIPDKKDGFDDIRLEFREML
KSQIVKGNNGLKKSKYVTFTVEADNMEQAISKLERLEIDILSNLKNMGVRAESLTGEERLKILHDILNPSKTFYFSYKDL
QRKESTKTYITPDEFNFTPSRYFKFGKFIGATSHFQILASELSDRMLSEFLDIDDNINISFHIRAIEQSQAIKMVKRKNT
DIDKMRIEENKKAVRSGYDMDILPSDLITYGEDVKSLLKDLQTRDERMFVVTIVFMNFARTIQKLENSIAQISSIANKHN
CKIKRLDHTQEQGLVSVLPLGVNKLEINRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMADRKRLKNPNGL
ILGTPGSGKSFSAKREMANAIIVTDDDVIICDPEGEYGNLVRQFDGEVIKVSSKSKDYLNPLDINMNYGDGDAPLKDKAN
FIMSMLELVVGGSGLTAEEKSVIDRCLPKIYEKYFDNPIKENMPILQDLYDMLKNQEEKVGKKLATEMEIYVTGSLNVFN
HQSNVDLNKKLLCFDIKELGSQLKKIGMLVIQDQVWNKVSLNRGNKATRYYIDEFHLLLKDEQTASYSVEIWKRFRKWGG
IPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKISKPQLKYVTNSNEGEGLLFFGNTIVPFIDKFPK
DTILYKKMTTKPEEVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF2320 NP_815976.1 traE protein Not tested Not named Protein 0.0 59
EFAU085_00716 YP_008394240.1 Type IV secretory pathway, VirB4 component Virulence Not named Protein 0.0 52