Gene Information

Name : nrdE (SIR_1044)
Accession : YP_008512976.1
Strain : Streptococcus intermedius B196
Genome accession: NC_022246
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase, alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : 1.17.4.1
Position : 1082815 - 1084974 bp
Length : 2160 bp
Strand : +
Note : -

DNA sequence :
ATGGGACTCAAACAATTAGAAGATGTGACGTATTTCCGTCTCAACAATGAAATCAACCGTCCAATCAATGGACAAATTAT
GCTCCACAAAGATAAAGAAGCTCTGGAGGCATTCTTTAAGGAAAATGTTGAACCAAATACAAAAAAATTCTCTTCTATTA
CTGAAAAAATTAACTATTTAATTCAAGAAAACTATTTAGAAAAAGAATTCATCCAGCTTTATTCGTCTGAATATATTGAA
GAATTAGCTGCTTTCATTCATGCACAAGATTTCCATTTTAAATCTTTTATGGCAGCTTATAAATTCTACAATCAATATGC
TCTTAAAACAAATGACGGTGAATATTATCTAGAAAGCATGGAAGATCGTGTTCTATTTAACGCGCTCTATTTTGCCAACG
GTAATGAAGCAATCGCTAAGGATATCGCTAATGAAATCATTCACCAGCGCTATCAACCGGCTACACCAAGCTTCCTCAAT
GCAGGACGTGCCCGTCGCGGTGAACTAGTTTCTTGCTTCCTCATCCAAGTAACAGATGATATGAACTCTATCGGTCGCTC
CATTAACTCTGCTCTGCAATTATCTCGTATCGGTGGTGGCGTTGGGATCTCTCTCAGTAACCTGCGTGAAGCAGGCGCTC
CCATCAAAGGGTACGAAGGGGCTGCTTCTGGTGTTGTACCAGTGATGAAACTGTTTGAGGACAGCTTCTCTTACTCTAAC
CAGTTGGGGCAACGTCAGGGAGCCGGGGTTGTTTACCTCAATGTCTTCCACCCAGATATCATCGCTTTCCTTTCTACAAA
AAAAGAAAATGCTGACGAAAAAGTTCGGGTTAAAACTCTTTCTTTAGGAGTTGTCATTCCAGATAAATTTTACGAATTAG
CTCGTAAGAATGAGGAAATGTACCTCTTCAGTCCTTACTCTATTGAACGCGAGTACGGTGTCCCATTTGCTTATATTGAT
ATTACTGAAAAATATGACGAATTGGTTGCCAATCCTAAGATTAATAAAACGAAAATTAAAGCTCGTGATTTAGAAACAGA
AATTTCTAAACTCCAACAAGAATCTGGCTATCCTTATGTCGTAAATATCGATACAGCTAACCGTTCAAATCCAATCGACG
GTAAAATCGTCATGAGTAATCTTTGCTCTGAAATCCTGCAAGTACAAGAGCCAAGTCTCCTGAATGATGCTCAAGAATTT
GTACATTTGGGAACGGATGTTTCTTGCAATCTTGGGTCGACCAATGTAGTCAACATGATGACTTCCCCTGACTTTGGAAA
ATCTATCCGCACTATGACACGCGCTTTGACCTTTGTCACAGATAGCTCTCACATCAAAGCTGTTCCAACCATTGACTACG
GCAATAGCTTAGCTCATACTTTTGGGCTAGGAGCCATGGGCTTACACAGTTATCTGGCTCAACAGTTGATTGAATATGGT
TCAGCTGAATCAGTTGAGTTTACCAGCATTTACTTTATGCTCATGAATTATTGGACTCTTGTTGAATCCAACAATATTGC
TCGTGAGCGTGGCATGACTTTCCACAACTTTGAAAAATCTGATTATGCTAACGGTACTTACTTTGACAAATACCTGACGG
GTGAATTTGTACCTCAGTCTGATCGTATCAAAGAACTCTTCACAGATATCTTTATCCCATCAGCAGAAGACTGGGCAGAG
TTACGCGATAAGGTCAAGGCTGACGGCCTCTACCATCAAAACCGCCTAGCCGTTGCACCAAATGGTTCTATCAGCTATAT
CAATGATGTTTCTGCTTCTATCCACCCCATTACCCAACGGATCGAAGAACGTCAAGAAAAGAAAATCGGTAAGATCTATT
ATCCTGCTGCTGGTCTGTCAACGGAGACTATTCCTTACTACACTAGCGCTTATGACATGGACATGCGCAAGGTGATTGAT
GTCTACGCAGCGGCAACTGAGCATGTGGACCAGGGTCTTTCCCTGACTCTCTTTATGCGCAGCGATATTCCTAAAGGCCT
CTATGAGTGGAAAAAAGAAGGCAAGCAAACAACCCGCGACCTTTCTATCCTGCGTAACTACGCCTTCAACAAGGGTATCA
AGTCCATCTACTACGTCCGTACCTTCACTGATGATGGTGGCGAAGTAGGTGCTAACCATTGTGAAAGCTGTGTGATCTAA

Protein sequence :
MGLKQLEDVTYFRLNNEINRPINGQIMLHKDKEALEAFFKENVEPNTKKFSSITEKINYLIQENYLEKEFIQLYSSEYIE
ELAAFIHAQDFHFKSFMAAYKFYNQYALKTNDGEYYLESMEDRVLFNALYFANGNEAIAKDIANEIIHQRYQPATPSFLN
AGRARRGELVSCFLIQVTDDMNSIGRSINSALQLSRIGGGVGISLSNLREAGAPIKGYEGAASGVVPVMKLFEDSFSYSN
QLGQRQGAGVVYLNVFHPDIIAFLSTKKENADEKVRVKTLSLGVVIPDKFYELARKNEEMYLFSPYSIEREYGVPFAYID
ITEKYDELVANPKINKTKIKARDLETEISKLQQESGYPYVVNIDTANRSNPIDGKIVMSNLCSEILQVQEPSLLNDAQEF
VHLGTDVSCNLGSTNVVNMMTSPDFGKSIRTMTRALTFVTDSSHIKAVPTIDYGNSLAHTFGLGAMGLHSYLAQQLIEYG
SAESVEFTSIYFMLMNYWTLVESNNIARERGMTFHNFEKSDYANGTYFDKYLTGEFVPQSDRIKELFTDIFIPSAEDWAE
LRDKVKADGLYHQNRLAVAPNGSISYINDVSASIHPITQRIEERQEKKIGKIYYPAAGLSTETIPYYTSAYDMDMRKVID
VYAAATEHVDQGLSLTLFMRSDIPKGLYEWKKEGKQTTRDLSILRNYAFNKGIKSIYYVRTFTDDGGEVGANHCESCVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 3e-178 52