Gene Information

Name : lysS (SCR2_1313)
Accession : YP_008511460.1
Strain : Streptococcus constellatus C818
Genome accession: NC_022245
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1340160 - 1341647 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGACTACTGAACATATTGAAGAATTAAATGACCAGCAACTGATTCGTCGTGAAAAAATGACCGCTTTAGCAGAACAAGG
TATTGACCCTTTTGGTAAACGTTTTGAACGTACTGCAGATTCTGCCCAATTAAAAGAAAAATATAGTGATAAAACAAAAG
AAGAACTACATGAATTAGCGGAAACTGCTACCATTGCAGGACGACTTATGACCAAGCGCGGGAAAGGCAAAGTTGGTTTT
GCTCATATCCAAGACCGTGAAGGTCAAATTCAAATCTATGTTAGAAAAGATACTGTTGGTGAAGAAAATTATCAAATTTT
TAAAAAAGCGGATATTGGCGACTTCCTTGGTATCGAAGGTGAGATCATGCGCACAGATATGGGAGAGCTGTCAATCAAAG
CAACTCACATCACACATCTCTCTAAAGCACTTCGTCCATTACCAGAAAAATTCCATGGACTAACAGACGTTGAAACGATT
TATCGTAAGCGTTATTTGGATTTAATTTCCAATCGGGAAAGCTTTGAACGCTTCGTTACTCGCAGTCGTATCGTTTCAGA
AATCCGCTGTTATCTTGATAACCAAGGATTCCTTGAAGTTGAAACACCTGTACTACATAATGAAGCTGGTGGTGCTGCTG
CTCGTCCATTTATTACTCATCACAATGCACAAAATATTGATATGGTACTTCGTATCGCAACTGAATTGCACTTAAAACGT
CTGATTGTTGGTGGTATGGAACGTGTTTATGAAATGGGACGCATTTTCCGTAATGAAGGAATGGACGCCACTCATAACCC
TGAGTTCACTACAATCGAGGCTTATCAGGCTTATGCAGACTTTGAAGATATCATGGACTTGACAGAAGGAATTATCCAAA
GTGCGGCTAAAGCTGTCACAGATGCTGAAAGTGTCCCTTATCAAGGTACTGAAATCTTTATCGGTCACAAATTTGCACGT
AAACACATGCTAGAAGCCATTAAAGAACAAACTGGCATTGATTTCTGGAAAGATATGACTCTCGAAGAAGCGACTGCGCT
GGCTAAAGAACATCATGTAACGGTTGAAAAACACTTTACAGTCGGTCACATTATCAATGCTTTCTTTGAAGATTTTGTTG
AGGATACCTTGATTCAACCTACATTTATCTATGGGCATCCAGTTGAAGTCTCGCCTCTTGCTAAGAAAAATGCAGATGAC
CCACGCTTTACAGACCGTTTTGAACTCTTTATCGTTGGACGCGAATTTGCCAACGCCTTTACTGAGCTGAATGACCCAAT
CGACCAATTATCGCGTTTTGAAGCGCAAGCCAAAGCTAAGGAACTCGGAGATGACGAAGCAACCGGTATCGACTACGACT
ATGTAGAAGCTCTTGAATACGGTATGCCACCAACTGGCGGCCTCGGAATTGGAATTGACCGCTTGATTATGCTGTTGACA
GATGTCACTTCTATCCGTGATGTATTGCTTTTCCCTACGATGAAGTAA

Protein sequence :
MTTEHIEELNDQQLIRREKMTALAEQGIDPFGKRFERTADSAQLKEKYSDKTKEELHELAETATIAGRLMTKRGKGKVGF
AHIQDREGQIQIYVRKDTVGEENYQIFKKADIGDFLGIEGEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETI
YRKRYLDLISNRESFERFVTRSRIVSEIRCYLDNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKR
LIVGGMERVYEMGRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEIFIGHKFAR
KHMLEAIKEQTGIDFWKDMTLEEATALAKEHHVTVEKHFTVGHIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNADD
PRFTDRFELFIVGREFANAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLIMLLT
DVTSIRDVLLFPTMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 5e-110 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_008511460.1 lysyl-tRNA synthetase VFG1668 Protein 3e-110 48