Gene Information

Name : clpC (SAIN_1665)
Accession : YP_008510069.1
Strain : Streptococcus anginosus C1051
Genome accession: NC_022244
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit ClpC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1738572 - 1741001 bp
Length : 2430 bp
Strand : -
Note : -

DNA sequence :
ATGAAATATTCAAAAGCTTTGACAGAAAGTATTGAGTCGGCACAACTGTTAGCGAGTCATTTTGAAACGGATTATTTGGA
GTCTTGGCATTTGTTGATTGCCATGGCGAATAATCCTTATAGTGTTGCGGGCTCAGTTTTAAATGATTATCCGCTTGAAA
TTGATGATTTTGAGAAAGCAGCCTTTCATATCACAGGAAAGATTTATCAACAAGAGGGAAGCTTTACCATTTGGCCGTTT
TCTCATCGTATGAAAGTGTTGTTTTTGACAGCTGAGCGAATTGCAGAGGCTGTGCATGCTAAGAATCTTGGGACAGAGCA
TGTGTTATTAGCTATGCTGTTTGATCGAGGAAGTTTGGCGGCACGTCTCCTTGAATTCACAGGATTTAGCTATGAGGATA
AAGAAGGCGTTTTGCGCATGACCGATCTTCGGAAAAACTTAGAGCATAAGGCAAGCTGGAATAAAGAGGATTTAAAGGCG
ATTCGTCACCTAAATAAAAATGCTGCAGCAACAAGACAAACGATGGCTAATATGATGGGAATGCCTCCTGCAACCAGTGG
CGGACTAGAAGATTATACTCGTGATTTAACCGAAATGGCTCATACGGGTCTTTTAGAACCGGTCATTGGGCGGGATAAAG
AGATTTCTCGCATGCTTCAGATTTTAAGTCGCAAGACGAAAAATAATCCAGTGTTGGTAGGAGATGCAGGAGTTGGGAAG
ACAGCATTAGCCCTTGGTTTGGCGCAACGTGTGGCAGCTGGTCAAGTTCCAAATGAGCTTGCAAAGATGAGAGTTTTAGA
GCTAGATTTAATGAATGTGGTGGCTGGAACTCGTTTTCGTGGTGATTTTGAGGAACGGATGAACAATATTATCAATGATA
TTGAAGCAGATGGACATGTCATTCTTTTCATTGATGAGCTTCATACTATTATGGGGTCGGGTAGCGGGATTGACTCGACA
TTAGATGCAGCGAACATTCTCAAGCCAGCTTTGGCTAGAGGGACGCTCAGAACGGTCGGCGCAACGACACAAGAAGAGTA
CCAGAAATATATTGAAAAGGACGCAGCTCTTTCACGGCGATTTGCCAAAATTACTATTGAAGAGCCGACGGTAGCCGATA
GTATTGCGATTTTACAGGGGCTCAAGAAAAGTTATGAAGAACACCACAAAGTGGTGATTACAGATTCAGCGATTGAGACA
GCTGTTAAGTATGCTCATCGTTATCTAACAAATAAACATCTACCTGACTCGGCGATCGATTTGCTAGATGAAGCTGCCGC
AACGGTACAAAATAAAGGTCCGCAAAATCATGTAAAAACAGAATTGAGTGCAGCAGACGAGGCTTTAATGGCAGGCGATT
GGAAAAAGGTTGGCACTTTGTTGGAGAAAGAAAGTCAGCCAATTGTCTACAAACTAAAGGTTAAAGATGAGGATATTTTG
GCAACACTCAGCGGTTTATCGGGAATTCCTGTGCAAAAGTTGACGCAAACAGATGCGAAGAAATACCTCAATTTAGAAAA
GGAACTGCACAAGCGGGTCATTGGGCAAAATGAAGCAATTTCTGCTATTAGTCGAGCGATTCGGCGCAATCAATCCGGTA
TCCGCACTAGCAAGCGTCCAATTGGCTCCTTTATGTTCTTAGGGCCAACCGGGGTCGGAAAAACTGAGCTAGCTAAGGCT
TTGGCAGAAGTTCTCTTTGATGACGAAACAGCACTGATTCGTTTTGATATGAGTGAATACATGGAAAAATTTGCTGCCAG
TCGCCTCAATGGAGCGCCTCCAGGTTATGTTGGTTATGAAGAAGGGGGCGAATTAACTGAAAAAGTTCGCAATCGTCCGT
ACTCTGTACTCCTCTTTGATGAGGTAGAAAAAGCACATCCTGATATTTTCAATGTGCTTCTCCAAGTCTTAGATGACGGG
GTGCTGACAGACAGCAAGGGGCGTAAGGTGGATTTTTCCAATACCATTATCATTATGACCAGCAATCTTGGTGCGACAAG
TTTGCGGGACGACAAGACGGTTGGTTTTGGAGCAAGAGATGTTCGTTTTGATCATGAAAATATGGAAAAACGAATGATGG
AAGAGCTAAAGAAAGCTTATCGTCCAGAATTTATTAACCGAATTGATGAAAAGGTTGTTTTTCACAGTTTGACTAGCGAA
GACATGCAAGAAGTGGTAAAAATCATGGTGAAACCGCTCGTTTCTAGTCTTGCAGAAAAAGGAATTAAACTCAAATTCCA
GCCGAGTGCTTTGAAACTTCTGGCTCAAGAGGGTTATGACCCTGAAATGGGAGCTCGTCCACTGCGCAGAACTCTACAAA
CTCAGGTAGAAGATCATTTATCCGAATTACTTTTAGCTGGTGAGTTACAGATGGGACAAAGTTTGAAAGTCGGTGTCAAA
GCTGGACAGCTGGAGTTTGAAGTGCTATGA

Protein sequence :
MKYSKALTESIESAQLLASHFETDYLESWHLLIAMANNPYSVAGSVLNDYPLEIDDFEKAAFHITGKIYQQEGSFTIWPF
SHRMKVLFLTAERIAEAVHAKNLGTEHVLLAMLFDRGSLAARLLEFTGFSYEDKEGVLRMTDLRKNLEHKASWNKEDLKA
IRHLNKNAAATRQTMANMMGMPPATSGGLEDYTRDLTEMAHTGLLEPVIGRDKEISRMLQILSRKTKNNPVLVGDAGVGK
TALALGLAQRVAAGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEADGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKYIEKDAALSRRFAKITIEEPTVADSIAILQGLKKSYEEHHKVVITDSAIET
AVKYAHRYLTNKHLPDSAIDLLDEAAATVQNKGPQNHVKTELSAADEALMAGDWKKVGTLLEKESQPIVYKLKVKDEDIL
ATLSGLSGIPVQKLTQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDETALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSE
DMQEVVKIMVKPLVSSLAEKGIKLKFQPSALKLLAQEGYDPEMGARPLRRTLQTQVEDHLSELLLAGELQMGQSLKVGVK
AGQLEFEVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-141 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpC YP_008510069.1 ATP-dependent Clp protease ATP-binding subunit ClpC VFG0079 Protein 9e-166 47
clpC YP_008510069.1 ATP-dependent Clp protease ATP-binding subunit ClpC VFG0080 Protein 3e-125 45