Gene Information

Name : lysS (SAIN_1217)
Accession : YP_008509649.1
Strain : Streptococcus anginosus C1051
Genome accession: NC_022244
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1273118 - 1274605 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGACTACTGAACATATTGAAGAATTAAATGACCAGCAACTGATTCGTCGTGAAAAAATGGCTGCTTTAGCAGAACAAGG
TATTGATCCATTTGGTAAACGTTTTGAACGTACTGCAGATTCTGCCCAATTAAAAGAAAAATATAGTGATAAAACAAAAG
AAGAACTACATGAATTAGCGGAAACTGCTACCATTGCGGGACGACTTATGACCAAGCGCGGGAAAGGCAAAGTCGGTTTT
GCTCATATCCAAGACCGTGAAGGTCAAATTCAAATCTATGTTAGAAAAGATACTGTTGGTGAAGAAAATTATCAAATTTT
CAAAAAGGCAGATATTGGGGACTTCCTTGGTATTGAAGGTGAGGTTATGCGCACAGATATGGGAGAGCTGTCAATCAAAG
CAACTCACATCACACACCTCTCTAAAGCACTTCGTCCATTACCAGAAAAATTCCATGGACTAACAGACGTTGAAACGATT
TATCGTAAGCGTTATTTGGATTTAATTTCCAATCGGGAAAGCTTTGAACGCTTCGTAACTCGCAGTCGTATCGTTTCAGA
AATTCGCCGTTATCTTGATAACCAAGGCTTCCTTGAAGTTGAAACACCCGTTTTACATAATGAAGCTGGTGGTGCTGCTG
CTCGTCCATTTATTACTCATCACAATGCACAAAATATTGATATGGTACTTCGTATCGCAACTGAATTGCACTTAAAACGT
CTGATTGTTGGTGGTATGGAACGTGTTTATGAAATGGGACGCATTTTCCGTAACGAAGGAATGGATGCCACTCACAATCC
TGAATTTACTACAATTGAAGCTTATCAGGCTTATGCGGATTTTGAGGATATCATGGACTTGACAGAAGGGATTATCCAAA
GTGCAGCTAAAGCCGTTACAGATGCTGAAAGCGTCCCTTATCAAGGTACTGAAATCTTTATCGGTCGCAAATTTGCACGC
AAGCATATGCTAGAAGCCATTAAAGAGCAGACGGGCATTGATTTCTGGAAAGAAATGACTCTCGAAGAAGCCACTGCACT
AGCTAAGGAACATCATGTAACGGTTGAAAAGCATTTTACAGTCGGTCATATTATCAATGCTTTCTTTGAAGATTTTGTTG
AGGATACCTTGATTCAACCTACATTTATTTATGGGCATCCAGTTGAAGTCTCGCCTCTTGCTAAGAAAAATACAGATGAC
CCACGCTTTACCGACCGCTTTGAACTCTTTATCGTTGGGCGCGAATTTGCCAATGCCTTTACCGAGTTGAACGATCCAAT
TGACCAATTATCGCGTTTTGAAGCGCAAGCCAAAGCTAAGGAACTCGGAGATGATGAAGCGACTGGTATCGACTACGACT
ATGTAGAAGCTCTTGAATACGGTATGCCACCAACTGGCGGCCTCGGAATTGGAATTGACCGCTTAATTATGCTGTTGACA
GATGTCACTTCTATTCGTGACGTATTGCTCTTCCCTACGATGAAATAA

Protein sequence :
MTTEHIEELNDQQLIRREKMAALAEQGIDPFGKRFERTADSAQLKEKYSDKTKEELHELAETATIAGRLMTKRGKGKVGF
AHIQDREGQIQIYVRKDTVGEENYQIFKKADIGDFLGIEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETI
YRKRYLDLISNRESFERFVTRSRIVSEIRRYLDNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKR
LIVGGMERVYEMGRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEIFIGRKFAR
KHMLEAIKEQTGIDFWKEMTLEEATALAKEHHVTVEKHFTVGHIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNTDD
PRFTDRFELFIVGREFANAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLIMLLT
DVTSIRDVLLFPTMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-111 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_008509649.1 lysyl-tRNA synthetase VFG1668 Protein 6e-112 48