Gene Information

Name : SBOV05031 (BN855_5440)
Accession : YP_008504382.1
Strain : Salmonella enterica 3114
Genome accession: NC_022241
Putative virulence/resistance : Virulence
Product : chaperone protein FimC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 568864 - 569556 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGCTGAATAGTATAAAATTAGGATTTATTGTTCTTCTCACGTTATTTACTTCGCTGAACGTACAGGCGGCGGGGGGGAT
TGCATTAGGCGCTACGCGTGTTATTTATCCCTCGGCGGCGAAACAGACTTCTCTGGCAATCAGTAATAGCGATACTCAAG
AACGTTACCTCGTCAATTCATGGATCGAAAATAGCGCCGGGCAGAAAGAAAAAACGTTTATCGTTACGCCGCCTTTATTC
GTCAGCGAACCCAAAAGCGAAAACACGCTGCGTATTATCTACGCCGGGCAACCGCTACCCGGGGATCGGGAGTCGTTATT
CTGGATGAACGTGAAAGCCATCCCGTCGGTCGATAAAAGTCATATTGAAGGAAAAAACGTTCTGCAACTGGCGATTCTGT
CGCGCATCAAACTGTTCGTGCGTCCGGCGAATTTGCCACAGACGCCGGAAGACGCGCCGACCTTGCTGAAATTTTCCCGT
GTCGGCAACCATCTCAAGATAACCAACCCATCTGCTTATTACCTCACGCTGGTCAATATCAGCGTGGGCGCGAAAAAGAT
TGATAACGTGATGATCGCGCCAAAAAGCGACATGCAAATTCCCTTACCGACTGGCGCGCAGGGCAGCGTGACATTTCAGA
CCGTCAATGATTACGGCGCATTGACGTCGGCGACAACGGCCAGTCTCGGTTAA

Protein sequence : 
MLNSIKLGFIVLLTLFTSLNVQAAGGIALGATRVIYPSAAKQTSLAISNSDTQERYLVNSWIENSAGQKEKTFIVTPPLF
VSEPKSENTLRIIYAGQPLPGDRESLFWMNVKAIPSVDKSHIEGKNVLQLAILSRIKLFVRPANLPQTPEDAPTLLKFSR
VGNHLKITNPSAYYLTLVNISVGAKKIDNVMIAPKSDMQIPLPTGAQGSVTFQTVNDYGALTSATTASLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 5e-52 50
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-48 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV05031 YP_008504382.1 chaperone protein FimC VFG0445 Protein 1e-103 99
SBOV05031 YP_008504382.1 chaperone protein FimC VFG0911 Protein 1e-48 50
SBOV05031 YP_008504382.1 chaperone protein FimC VFG1644 Protein 2e-48 50
SBOV05031 YP_008504382.1 chaperone protein FimC VFG0875 Protein 4e-53 49
SBOV05031 YP_008504382.1 chaperone protein FimC VFG0455 Protein 1e-40 42