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Name : SBOV46821 (BN855_46660) Accession : YP_008508458.1 Strain : Salmonella enterica 3114 Genome accession: NC_022241 Putative virulence/resistance : Virulence Product : outer membrane usher protein SfmD Function : - COG functional category : - COG ID : - EC number : - Position : 4669463 - 4671193 bp Length : 1731 bp Strand : - Note : - DNA sequence : ATGTTGCCGGACAGTATGAAAGGGTTCGCCCCGGTCATTCGCGGGGTGGCCAAAAGCAGCGCGCAGGTAACCGTTGAACA AAACGGTTATACCATCTACAAAACTAACGTTCCGGCGGGTCCATTCGCCATCAACGATCTTTATCCAACCGGCGGTTCGG GCGACCTGTACGTCACCATCAAAGAATCCGATGGTTCTGAACAGCATTTCATTGTGCCCTACGCCAGCGTTCCGGTATTA CAGCGTGAAGGCCACCTGAAATACGACCTGACGGTAGGCCGCACGCGTTCATCAGATACGCATTCCGCGCAACAGAACTT CGCTGAACTGACGGCCTTATACGGATTAGCAGGCGGCATAACCGCCTATGGCGGAATAGAGAGTACGCTGAGCAATGATG TTTATCATGCGGCGCTCATCGGGACAGGCTTAAACCTTGGCGATCTGGGCGCATTGTCTTTAGACGTCACCAACTCATGG TCAAAAATTAAAGCAGGCGATGTGGTTAGCGATACGCTTACCGGACAATCCTGGCGTATTCGTTACAGCAAAGATATTCA GTCAACAGGCACCAATTTCACTGTCGCCGGCTACCGTTATTCGACCAAAGATTACTACGCTCTTGAGGATGTGCTGGATA CCTATAGCGATAATAGTCACTATGATCATGTACGTAATCGCACCGACCTGTCGTTATCGCAAGACATTATCTACGGTTCC ATTTCACTCACTTTATATAATGAAGATTACTGGAATGACACTCATACCACATCATTAGGTATTGGCTATAACAACACATG GCATAACGTAAGCTATGGCATTAACTATTCTTATACGCTGAACGCCGATAATTCTCAGGATGAAGACGACGATACGGAAG ACAGTAATGACCAGCAAATTTCAATCAATATTAGTATTCCGTTAGATGCCTTTATGCCGTCAACGTATGCCACCTACAAT ATGAACTCCGCGAAAGACGGCGATACCACGCATACTGTCGGTTTAAACGGAACAGCGCTGGCACAGAAAAATCTCTCATG GAGCGTTCAGGAAGGTTATTCCTCTCAAGAGAAAGCCACCAGCGGTAATGTGAGCGCAACCTATAACGGGACGTATGCGG ATATTAACGGCGGATATAGCTACGATAATCATATGCGTCGCCTGAATTATGGCGTTCAGGGCGGCGTACTGTTACATCGA AATGGCCTGACACTATCCCAGCCAATGGACGACACCATCATATTGGTTAAAGCCCCTGGCGCAGCGGGTGTCCCCGTGAA TAACGAAACGGGCGTGGACACCGATTTTCGGGGGTATGCCGTCGTACCTTATGCTTCGCCTTACCATCGTAATGAAGTGT CTTTAGATACGACTGGCATTAGAAAAAATATTGAGCTCATTGATACCAGTAAAACACTGGTGCCTACCCGTGGCGCGGTG GTCAGGGCTGAATATAAAACCAATATTGGTTACAAGGCATTGATGGTATTAACCCGCATAAACAATCTGCCTGTTCCTTT TGGCGCGACCGTCTCGTCTTTAATAAAACCAGACAATCACAGCAGTTTTGTTGGTGATGCGGGGCAAGCCTGGTTAACCG GACTGGAAAAACAAGGGCGGTTATTAGTGAAGTGGGGGCCAACAGCAGCAGACCAGTGTCAGGTCTCTTATCGTATACCG AGCTCCCCCTCCGCTTCTGGCGTAGAAATCTTACACGAGCAATGCCAGTGA Protein sequence : MLPDSMKGFAPVIRGVAKSSAQVTVEQNGYTIYKTNVPAGPFAINDLYPTGGSGDLYVTIKESDGSEQHFIVPYASVPVL QREGHLKYDLTVGRTRSSDTHSAQQNFAELTALYGLAGGITAYGGIESTLSNDVYHAALIGTGLNLGDLGALSLDVTNSW SKIKAGDVVSDTLTGQSWRIRYSKDIQSTGTNFTVAGYRYSTKDYYALEDVLDTYSDNSHYDHVRNRTDLSLSQDIIYGS ISLTLYNEDYWNDTHTTSLGIGYNNTWHNVSYGINYSYTLNADNSQDEDDDTEDSNDQQISINISIPLDAFMPSTYATYN MNSAKDGDTTHTVGLNGTALAQKNLSWSVQEGYSSQEKATSGNVSATYNGTYADINGGYSYDNHMRRLNYGVQGGVLLHR NGLTLSQPMDDTIILVKAPGAAGVPVNNETGVDTDFRGYAVVPYASPYHRNEVSLDTTGIRKNIELIDTSKTLVPTRGAV VRAEYKTNIGYKALMVLTRINNLPVPFGATVSSLIKPDNHSSFVGDAGQAWLTGLEKQGRLLVKWGPTAADQCQVSYRIP SSPSASGVEILHEQCQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 4e-92 | 41 |
