Gene Information

Name : SBOV43451 (BN855_43320)
Accession : YP_008508128.1
Strain : Salmonella enterica 3114
Genome accession: NC_022241
Putative virulence/resistance : Virulence
Product : putative ABC exporter outer membrane component-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4317840 - 4319147 bp
Length : 1308 bp
Strand : +
Note : -

DNA sequence :
ATGTTTTTTCTGACGACTGCTTTTATTACACAAAGCACATACGCCAGCGAGCTTCCGGTCATTCCTCTAAGAGATTTAGT
TAATGCCGCATTAACGCATCAGCCCTCTGTTGCTGTTTCATATTATGAGACTGAAAAGAAAAACAGTGACTTAGATCTTT
CACGGGCAGCACTTTATCCTACCCTGGATCTAACATCTGGCCTTAATAATAACAGGAAAGAGTCATCAGGTACCGAGAGG
AACGTTGAAAATAAGGTGTCTTTATCATACCGAATAACGGATTTTGGAGTGAGGGGGGCTAATATCAGGAAATCTGAATA
TGAAAGAGATAATAGTAAAACTGACTATGAAAAAACAAAGAATATAGTGTCTCAGGAGGTTGTGACAACCTATTACAACA
TCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGATGCTGGAAACTTTTTCGTTG
CTGGTATCTTCCGGTGTAGCGATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATGCATTAAATACCAGAAGCAT
TATGTATCAGTCGATGTTGGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAATTTATCGCCAGTTCAGATTC
AAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAAGCCCTGAAAAACTTATGGACATGGTGATGAAA
TACAACGATGACTATAAGATGCTTGTCAATACCCGAAAAGCCGCGACCGAAGATATTAATGCCGCAAAATCATCCTATTT
TCCGACTGTAGATCTTGTTTCCAGCTATGTACAGAATAACCCGAGCGGTAGTGCCAAAAAAAGTGATTATGAAGATGAAT
TTAAAACGGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTCAGAAATTCAGCCCAGGAAAGAAAAATGGTGGCAAGT
TACTCGCAGGCTAAGCTGCAAATTGACGATTTTTTGATTAAAACGCGTTATAACATTGATTCACAACTTTCAAGATACGC
CGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACTGAATTATATGAGCAGGAGT
TTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGCATATGTAAGCATGATCGAC
AGCAAATATAGCCTGTATATTTTAAAGCTACAGCAACTCTCATTGATTTTTCATTTAATGGATTATTTAAAAGGAAATAC
TGAAAGTGAGTTAAATGTAATGAAATGA

Protein sequence :
MFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRAALYPTLDLTSGLNNNRKESSGTER
NVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDYEKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLETFSL
LVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPVQIQSDEKFNLFKKYIFVESPEKLMDMVMK
YNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRNSAQERKMVAS
YSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYVSMID
SKYSLYILKLQQLSLIFHLMDYLKGNTESELNVMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC4138 YP_219125.1 ABC transporter outer membrane protein Not tested SPI-4 Protein 0.0 100
STM4259 NP_463124.1 ABC exporter outer membrane component Not tested SPI-4 Protein 0.0 100
siiC CAE11795.1 putative type-I secretion protein, putative outer membrane component Virulence SPI-4 Protein 0.0 100
STY4456 NP_458556.1 putative type-I secretion protein Not tested SPI-4 Protein 0.0 99
spi4_C AAC26641.1 ABC exporter outer membrane component homolog Virulence SPI-4 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV43451 YP_008508128.1 putative ABC exporter outer membrane component-like protein VFG0579 Protein 0.0 100