Gene Information

Name : SBOV29141 (BN855_29280)
Accession : YP_008506736.1
Strain : Salmonella enterica 3114
Genome accession: NC_022241
Putative virulence/resistance : Virulence
Product : type III secretion apparatus protein SpaR/YscT/HrcT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2911203 - 2911994 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence :
ATGCTTTACGCGTTGTACTTTGAAATTCATCACCTGGTTGCGTCTGCGGCACTAGGGTTTGCTCGCGTAGCGCCGATTTT
TTTCTTCCTGCCGTTTTTGAATAGCGGGGTATTAAGCGGCGCGCCGAGAAACGCCATTATCATCCTGGTGGCATTGGGAG
TATGGCCGCATGCATTGAACGAGGCGCCGCCGTTTTTATCGGTGGCTATGATCCCGTTAGTTCTGCAAGAAGCGGCGGTA
GGCGTCATGCTGGGCTGTCTGCTGTCATGGCCTTTTTGGGTTATGCATGCGCTGGGTTGTATTATCGATAACCAGCGAGG
GGCAACGCTAAGTAGCAGTATCGATCCGGCAAACGGTATTGATACCTCGGAAATGGCTAATTTCCTGAATATGTTTGCCG
CTGTCGTTTATTTACAAAACGGCGGTCTGGTCACGATGGTTGACGTGTTAAATAAAAGCTATCAGCTATGCGATCCGATG
AACGAGTGCACGCCTTCATTACCGCCGCTATTAACGTTTATTAATCAGGTGGCTCAAAACGCGTTGGTTCTGGCCAGTCC
GGTGGTATTAGTGCTGTTGCTGTCAGAAGTATTCCTGGGTTTATTGTCGCGCTTTGCTCCGCAAATGAACGCTTTTGCGA
TTTCACTGACGGTAAAAAGCGGTATTGCCGTTTTAATTATGCTGCTTTATTTCTCTCCGGTACTACCGGACAATGTACTG
CGACTCTCTTTCCAGGCCACAGGATTAAGCAGTTGGTTTTACGAGCGAGGGGCGACGCATGTCCTCGAATAA

Protein sequence :
MLYALYFEIHHLVASAALGFARVAPIFFFLPFLNSGVLSGAPRNAIIILVALGVWPHALNEAPPFLSVAMIPLVLQEAAV
GVMLGCLLSWPFWVMHALGCIIDNQRGATLSSSIDPANGIDTSEMANFLNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPM
NECTPSLPPLLTFINQVAQNALVLASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTVKSGIAVLIMLLYFSPVLPDNVL
RLSFQATGLSSWFYERGATHVLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 3e-105 99
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 6e-103 99
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 7e-105 99
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 7e-105 99
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 6e-33 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV29141 YP_008506736.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG0549 Protein 1e-105 99
SBOV29141 YP_008506736.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG1014 Protein 6e-36 52
SBOV29141 YP_008506736.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG2453 Protein 6e-32 45