Gene Information

Name : SBOV29131 (BN855_29270)
Accession : YP_008506735.1
Strain : Salmonella enterica 3114
Genome accession: NC_022241
Putative virulence/resistance : Virulence
Product : type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2910146 - 2911216 bp
Length : 1071 bp
Strand : -
Note : -

DNA sequence :
ATGTCCTCGAATAAAACAGAAAAACCGACTAAAAAACGGCTGGAAGACTCCGCTAAAAAAGGCCAGTCATTTAAAAGTAA
AGATCTCATTATCGCCTGCCTGACGCTGGGAGGAATTGCCTATCTGGTGTCGTATGGCTCATTTAATGAGTTTATGGGGA
TAATAAAGATCATTATTGCGGATAATTTTGATCAGAGCATGGCTGACTACAGTTTGGCCGTTTTTGGGATAGGGTTAAAA
TATCTGATTCCATTTATGCTGCTCTGCTTAGTGTGTTCCGCATTACCGGCGTTATTACAGGCCGGTTTTGTGCTGGCGAC
AGAAGCATTAAAACCTAATTTATCGGCGTTAAACCCGGTAGAAGGGGCGAAAAAACTTTTTAGTATGCGCACGGTTAAAG
ATACGGTCAAAACCCTACTGTATCTCTCATCCTTTGTGGTGGCCGCCATCATTTGCTGGAAGAAATATAAGGTTGAAATC
TTTTCTCAGTTAAATGGCAATATTGTGGATATAGCCGTCATTTGGCGTGAACTTCTCCTCGCGCTGGTATTAACTTGCCT
TGCTTGCGCATTGATTGTCTTATTATTGGATGCTATTGCGGAATATTTCCTGACCATGAAAGACATGAAAATGGATAAGG
AAGAAGTGAAGCGTGAAATGAAGGAGCAGGAAGGGAACCCAGAGGTTAAATCTAAAAGACGTGAAGTTCATATGGAAATT
CTGTCTGAACAGGTGAAATCCGATATTGAAAACTCACGCCTGATTGTTGCCAACCCCACGCATATTACGATCGGGATTTA
TTTTAAACCCGAATTGATGCCGATTCCGATGATCTCGGTGTATGAAACGAATCAGCGCGCGCTGGCCGTCCGCGCCTATG
CGGAGAAGGTTGGCGTACCTGTGATCGTCGATATCAAACTGGCGCGCAGTCTTTTCAAAACCCATCGCCGTTATGATCTG
GTGAGTCTGGAAGAAATTGATGAAGTTTTACGTCTTCTGGTTTGGCTGGAAGAGGTAGAAAACGCGGGCAAAGACGTTAT
TCAGCCACAAGAAAACGAGGTACGGCATTGA

Protein sequence :
MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADNFDQSMADYSLAVFGIGLK
YLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEI
FSQLNGNIVDIAVIWRELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVIVDIKLARSLFKTHRRYDL
VSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaS NP_457281.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 3e-133 99
spaS NP_806490.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 3e-133 99
spaS YP_217806.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 2e-132 99
spaS NP_461808.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 5e-133 99
spaS AAS66868.1 SpaS Not tested SSR-2 Protein 3e-67 55
ECs3721 NP_311748.1 surface presentation of antigens protein SpaS Not tested LIM Protein 4e-59 54
ysaU AAS66849.1 YsaU Not tested SSR-1 Protein 2e-43 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV29131 YP_008506735.1 type III secretion protein VFG0548 Protein 2e-133 99
SBOV29131 YP_008506735.1 type III secretion protein VFG1015 Protein 3e-51 48
SBOV29131 YP_008506735.1 type III secretion protein VFG2452 Protein 4e-48 45