Gene Information

Name : SBOV29081 (BN855_29220)
Accession : YP_008506730.1
Strain : Salmonella enterica 3114
Genome accession: NC_022241
Putative virulence/resistance : Virulence
Product : cell invasion protein SipA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2903292 - 2905304 bp
Length : 2013 bp
Strand : -
Note : -

DNA sequence :
ATGCAGACCGAGATCAAAACGCAGGCCACGAATCTTGCGGCGAATCTTTCCGCAGTCAGAGAAAGTGCCACAACGACGCT
GTCAGGGGAAATTAAAGGCCCGCAACTGGAAGATTTTCCCGCGCTGATCAAACAGGCGAGTCTGGATGCATTGTTTAAAT
GCGGGAAAGACGCTGAGGCGTTAAAAGAAGTTTTTACCAATTCAAATAATGTCGCCGGTAAGAAAGCGATAATGGAGTTT
GCCGGGCTCTTTCGTTCAGCGCTCAACGCCACCAGTGATTCTCCTGAGGCGAAGACGCTACTGATGAAGGTGGGGGCAGA
GTATACCGCGCAAATCATAAAAGATGGCCTGAAAGAAAAGTCAGCTTTTGGGCCATGGCTGCCAGAAACAAAGAAAGCGG
AAGCGAAGCTGGAAAACCTGGAAAAGCAGCTGTTAGATATTATCAAAAATAACACTGGTGGTGAATTAAGTAAATTATCG
ACGAATCTTGTTATGCAGGAGGTGATGCCCTATATTGCCAGCTGCATTGAACATAACTTTGGCTGTACGTTAGATCCGTT
AACCCGCAGCAATCTTACGCACCTTGTTGACAAAGCGGCGGCGAAGGCGGTTGAGGCGCTTGATATGTGCCACCAAAAAT
TAACGCAAGAGCAGGGTACCAGCGTAGGACGGGAAGCCCGGCACCTTGAAATGCAAACGTTGATACCCCTGCTGCTACGT
AATGTTTTTGCACAAATTCCTGCAGATAAACTGCCTGACCCTAAAATTCCGGAGCCTGCGGCTGGACCAGTACCTGATGG
TGGGAAAAAAGCAGAACCTACGGGTATTAATATCAATATTAATATTGATAGCAGTAACCATAGCGTGGATAACAGTAAGC
ATATTAACAATAGCCGAAGCCATGTCGATAATAGCCAGCGCCATATCGATAATAGCAACCATGATAATAGCCGGAAGACG
ATTGATAATAGCCGAACATTTATTGATAACAGCCAACGCAATGGCGAGTCACACCATTCGACTAACAGCAGCAACGTAAG
TCATAGTCATTCGCGTGTGGATTCGACTACGCATCAAACGGAGACGGCACACAGCGCCAGCACAGGGGCAATTGACCATG
GCATCGCGGGTAAAATTGACGTCACGGCTCATGCGACGGCAGAGGCTGTGACCAACGCTTCATCCGAAAGTAAAAATGGA
AAGATGGTCACGTCAGAAAAGGGCACTACGGGTGAAACAACCTCTTTTGATGAAGTCGATGGCGTAACCAGCAAGAGCAT
TATCGGCAAGCCGGTACAGGCCACGGTGCACGGCGTTGATGATAATAAACAGCAAAGCCAGACGGCAGAGATTGTGAATG
TGAAGCCGCTTGCCAGTCAACTGGCTGGCGTCGAGAATGTTAAAACCGATACCTTACAATCAGACACGACGGTAATTACA
GGTAATAAAGCCGGTACGACCGATAATGATAATAGTCAGACAGATAAGACTGGCCCATTTTCTGGTTTGAAGTTTAAGCA
AAATAGTTTCCTCTCAACAGTACCGAGCGTTACGAATATGCATTCAATGCATTTCGACGCCCGTGAGACGTTTTTGGGTG
TGATACGTAAAGCCCTGGAGCCAGATACCTCCACACCGTTCCCTGTACGCAGAGCGTTTGACGGCTTGCGTGCGGAAATA
TTACCCAATGACACGATAAAGAGTGCAGCGTTGAAAGCGCAATGTAGCGATATTGACAAGCACCCAGAATTGAAAGCGAA
AATGGAGACTCTCAAAGAGGTCATTACTCATCATCCACAAAAAGAAAAACTGGCTGAGATTGCACTGCAGTTTGCCAGAG
AGGCGGGGCTGACCAGGCTAAAAGGGGAAACTGACTATGTGTTAAGTAATGTGCTGGACGGCCTTATCGGAGACGGTAGC
TGGCGAGCTGGCCCGGCTTACGAGTCATACCTGAATAAACCTGGCGTGGATCGGGTTATTACTACCGTTGATGGCTTGCA
CATGCAGCGTTAA

Protein sequence :
MQTEIKTQATNLAANLSAVRESATTTLSGEIKGPQLEDFPALIKQASLDALFKCGKDAEALKEVFTNSNNVAGKKAIMEF
AGLFRSALNATSDSPEAKTLLMKVGAEYTAQIIKDGLKEKSAFGPWLPETKKAEAKLENLEKQLLDIIKNNTGGELSKLS
TNLVMQEVMPYIASCIEHNFGCTLDPLTRSNLTHLVDKAAAKAVEALDMCHQKLTQEQGTSVGREARHLEMQTLIPLLLR
NVFAQIPADKLPDPKIPEPAAGPVPDGGKKAEPTGINININIDSSNHSVDNSKHINNSRSHVDNSQRHIDNSNHDNSRKT
IDNSRTFIDNSQRNGESHHSTNSSNVSHSHSRVDSTTHQTETAHSASTGAIDHGIAGKIDVTAHATAEAVTNASSESKNG
KMVTSEKGTTGETTSFDEVDGVTSKSIIGKPVQATVHGVDDNKQQSQTAEIVNVKPLASQLAGVENVKTDTLQSDTTVIT
GNKAGTTDNDNSQTDKTGPFSGLKFKQNSFLSTVPSVTNMHSMHFDARETFLGVIRKALEPDTSTPFPVRRAFDGLRAEI
LPNDTIKSAALKAQCSDIDKHPELKAKMETLKEVITHHPQKEKLAEIALQFAREAGLTRLKGETDYVLSNVLDGLIGDGS
WRAGPAYESYLNKPGVDRVITTVDGLHMQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sipA NP_461803.1 secreted effector protein Virulence SPI-1 Protein 0.0 99
sipA YP_217801.1 cell invasion protein Virulence SPI-1 Protein 0.0 99
sipA NP_457276.1 pathogenicity island 1 effector protein (function unknown) Virulence SPI-1 Protein 0.0 98
sipA NP_806485.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV29081 YP_008506730.1 cell invasion protein SipA VFG0543 Protein 0.0 99