Gene Information

Name : SBOV28901 (BN855_29040)
Accession : YP_008506712.1
Strain : Salmonella enterica 3114
Genome accession: NC_022241
Putative virulence/resistance : Virulence
Product : chelated iron transport system membrane protein YfeD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2887565 - 2888413 bp
Length : 849 bp
Strand : +
Note : -

DNA sequence :
ATGTTCTTAACAACGTTACTGGAACCCTTTCAGTTTGATTTTATGGTGAACGCCCTTATGGTTTCGGTCATTGTAGCGAT
TCCCTGCGCCTTACTGTCCGTGTTTTTAGTGTTAAAAGGCTGGGCGTTAATGGGCGACGCAATGAGTCATGCGGTATTCC
CCGGGGTCGTGCTGGCATATATTGTGGGGATCCCCCTGGCGATTGGCGCTTTCATTGCCGGATTATTTTGCGCTATCGCC
ACCGGCTATCTGGACGATAACAGCCGCATCAAACGTGATACGGTGATGGGCATCGTCTTTTCCGGGATGTTTGGCGCAGG
TCTGGTGCTCTATGTTTCTATTCAATCGGAAGTGCATCTGGATCACATCCTGTTTGGGGATATGCTGGGCGTATCGCTGG
GGGATATTGTACAAACGTCAGTTATTGCACTGGGTATTGCGTTAATCATTGGGCTGAAATGGAAAGATCTCCTGCTACAC
GCTTTTGACCCGCACCAGGCGAAAGCCAGCGGGCTGAATACCACGCTACTGCATTATGGCCTGCTATGTATGATTGCGCT
GACTATCGTCGCCACGCTGAAATCGGTGGGCATTATTCTGTCAATCTCACTACTTATCGCCCCCGGCGCAATTGCCATTT
TGCTGACGCGACGCTTTGCGCGCGCGCTGGGATTAGCGGTGAGTCTGTCAGTTATTACCGCTTTTGCGGGCGTCTATCTG
TCTTTTTACCTTGATAGCGCGCCAGCGCCGACCATCGTGGTATTATTTGCCATCGTGTTTATTGTGGTATTTATTTACGC
AACATGGCGCGACAGGAGTAATGAAATCGTACCAGAGGCGCAAGGTTAA

Protein sequence :
MFLTTLLEPFQFDFMVNALMVSVIVAIPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAYIVGIPLAIGAFIAGLFCAIA
TGYLDDNSRIKRDTVMGIVFSGMFGAGLVLYVSIQSEVHLDHILFGDMLGVSLGDIVQTSVIALGIALIIGLKWKDLLLH
AFDPHQAKASGLNTTLLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIAILLTRRFARALGLAVSLSVITAFAGVYL
SFYLDSAPAPTIVVLFAIVFIVVFIYATWRDRSNEIVPEAQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 7e-104 99
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 6e-104 99
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-103 99
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-103 99
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-104 99
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 7e-34 41
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-33 41
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-33 41
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 9e-34 41
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 9e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV28901 YP_008506712.1 chelated iron transport system membrane protein YfeD BAC0352 Protein 3e-104 99
SBOV28901 YP_008506712.1 chelated iron transport system membrane protein YfeD BAC0442 Protein 4e-55 54
SBOV28901 YP_008506712.1 chelated iron transport system membrane protein YfeD BAC0441 Protein 8e-34 43
SBOV28901 YP_008506712.1 chelated iron transport system membrane protein YfeD BAC0351 Protein 5e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV28901 YP_008506712.1 chelated iron transport system membrane protein YfeD VFG0528 Protein 3e-104 99
SBOV28901 YP_008506712.1 chelated iron transport system membrane protein YfeD VFG0527 Protein 4e-34 41