Gene Information

Name : SBOV28891 (BN855_29030)
Accession : YP_008506711.1
Strain : Salmonella enterica 3114
Genome accession: NC_022241
Putative virulence/resistance : Virulence
Product : chelated iron transport system membrane protein YfeC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2886714 - 2887574 bp
Length : 861 bp
Strand : +
Note : -

DNA sequence :
ATGAACTGGCTTGTTGAGCCGTTTAGCTACCAGTATATGCTCAACGCGATGTGGGTCTCCGCGATGGTGGGCGGTCTGTG
CGCGTTTCTCTCCTGCTATTTGATGCTCAAAGGCTGGTCGCTCATTGGCGATGCGCTATCTCACTCTATTGTGCCTGGCG
TCGCTGGCGCCTGGATGTTAGGGCTGCCCTTCTCGCTCGGCGCGTTTCTTTCCGGCGGACTGGCGGCAGGCAGTATGCTC
TTTCTTAACCAACGCTCACGCCTGAAAGAAGACGCGATTATCGGGCTTATCTTCTCCTCTTTTTTTGGCGTCGGCCTTTT
TATGGTGTCGCTCAATCCGATGTCGGTGAATATCCAGACGATTATTCTCGGCAACGTGCTGGCGATCGCGCCAGCGGATA
TTGCGCAACTGGCGATTATCGGCGCAGTCTCGCTGACGATTCTGCTGTTAAAATGGAAAGATTTGATGGTCGTCTTTTTC
GATGAAACTCATGCGCGTTCTATCGGGCTTAATCCGGGTCGACTAAAGCTGTTGTTTTTCACTCTATTGTCCGTCTCCAC
CGTGGCGGCCCTGCAAACCGTTGGGGCGTTCCTGGTGATCTGTCTCGTCGTCACGCCGGGCGCGACAGCCTGGTTACTCA
CCGACCGTTTTCCACGTCTGCTCATGATTGCCGTCGTGATTGGCAGCCTGACCAGTTTTCTGGGCGCATGGCTTAGCTAC
TGGCTGGATGGCGCCACTGGCGGAATTATTGTCGTCATGCAAACCTTACTGTTCATCACGGCCTTTATTTTCGCCCCGAA
ACACGGTCTGTTAGCCAACCGTCGACGCGCCCGCCTGCAGAAGGAGCCGACATGTTCTTAA

Protein sequence :
MNWLVEPFSYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAWMLGLPFSLGAFLSGGLAAGSML
FLNQRSRLKEDAIIGLIFSSFFGVGLFMVSLNPMSVNIQTIILGNVLAIAPADIAQLAIIGAVSLTILLLKWKDLMVVFF
DETHARSIGLNPGRLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVVIGSLTSFLGAWLSY
WLDGATGGIIVVMQTLLFITAFIFAPKHGLLANRRRARLQKEPTCS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-114 99
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-114 99
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 9e-115 99
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-114 99
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-114 99
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-39 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-39 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-39 41
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 7e-39 41
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 7e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV28891 YP_008506711.1 chelated iron transport system membrane protein YfeC BAC0351 Protein 6e-115 99
SBOV28891 YP_008506711.1 chelated iron transport system membrane protein YfeC BAC0441 Protein 5e-75 67
SBOV28891 YP_008506711.1 chelated iron transport system membrane protein YfeC BAC0352 Protein 2e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV28891 YP_008506711.1 chelated iron transport system membrane protein YfeC VFG0527 Protein 5e-115 99
SBOV28891 YP_008506711.1 chelated iron transport system membrane protein YfeC VFG0528 Protein 2e-39 42