Gene Information

Name : SBOV13961 (BN855_14380)
Accession : YP_008505266.1
Strain : Salmonella enterica 3114
Genome accession: NC_022241
Putative virulence/resistance : Virulence
Product : type III secretion low calcium response chaperone LcrH/SycD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1426322 - 1426756 bp
Length : 435 bp
Strand : +
Note : -

DNA sequence :
ATGCGGTTTTTCCGGCGTGGCGGCTCGCTGCGTATGTTGTTGGATGACGATGTTACACAGCCGCTTAATACTCTGTATCG
CTATGCCATGCAGCTTATGGAGGTAAAAGAGTTCGCCGGCGCAGCGCGACTTTTTCAATTGTTGACGATATATGATGCCT
GGTCATTTGACTACTGGTTTAGGTTAGGGGAATGCTGCCAGGCTCAAAAACATTGGGGGGAAGCGATATACGCTTATGGA
CGCGCGGCACAAATTAAGATTGATGCGCCGCAGGCGCCATGGGCCGCAGCGGAATGCTATCTCGCGTGTGATAACGTCTA
TTATGCAATCAAAGCGTTAAAGGCCGTGGTGCGTATTTGCGGCGAGGTCAGTGAACATCAAATTCTCCGACAGCGTGCAG
AAAAGATGTTACAGCAACTTTCTGACAGGAGCTAA

Protein sequence :
MRFFRRGGSLRMLLDDDVTQPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQAQKHWGEAIYAYG
RAAQIKIDAPQAPWAAAECYLACDNVYYAIKALKAVVRICGEVSEHQILRQRAEKMLQQLSDRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sscA NP_460364.1 secretion system chaperone Virulence SPI-2 Protein 8e-63 99
sscA AAC28880.1 putative secretion chaperone Virulence SPI-2 Protein 5e-63 99
sscA CAA12186.1 SscA Virulence SPI-2 Protein 5e-63 99
SC1420 YP_216407.1 secretion system chaperone protein SscA Virulence SPI-2 Protein 4e-62 98
sscA NP_456129.1 putative Type III secretion system chaperone protein Virulence SPI-2 Protein 2e-62 98
sscA NP_805070.1 type III secretion system chaperone protein Virulence SPI-2 Protein 2e-62 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV13961 YP_008505266.1 type III secretion low calcium response chaperone LcrH/SycD VFG0500 Protein 2e-63 99