Gene Information

Name : lysS (SANR_1428)
Accession : YP_008501132.1
Strain : Streptococcus anginosus C238
Genome accession: NC_022239
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1514247 - 1515734 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGACTACTGAACATATTGAAGAATTAAATGACCAGCAGCTGATTCGTCGTGAAAAAATGGCTGCTTTAGCAGAACAAGG
TATTGACCCATTTGGTAAACGTTTTGAACGCACCGCAGATTCTGCCCAATTAAAAGAAAAATATAGTGATAAAACAAAAG
AAGAGCTACATGAATTAGCAGAAACTGCTACCATTGCAGGACGACTTATGACCAAGCGCGGGAAAGGCAAAGTCGGTTTT
GCTCATATCCAAGACCGTGAAGGTCAAATTCAAATCTATGTCAGAAAAGATACTGTTGGTGAAGAGAATTATCAAATTTT
CAAAAAAGCGGATATTGGGGACTTCCTTGGTATTGAAGGTGAGATTATGCGCACAGATATGGGAGAGCTGTCAATCAAAG
CAACTCACATCACACATCTCTCTAAAGCACTTCGTCCATTACCAGAAAAATTCCATGGACTAACAGACGTTGAAACGATT
TATCGTAAGCGTTATTTGGATTTAATTTCCAATCGGGAAAGCTTTGAACGCTTCGTAACTCGCAGTCGTATCGTTTCAGA
AATTCGCCGTTATCTTGATAACCAAGGATTCCTTGAAGTTGAAACACCTGTACTACATAATGAAGCTGGTGGTGCTGCTG
CTCGTCCATTTATTACTCATCACAATGCGCAAAATATTGATATGGTGCTTCGTATCGCGACTGAATTGCACTTAAAACGT
CTAATTGTTGGTGGTATGGAACGTGTTTATGAAATGGGACGCATTTTCCGTAATGAAGGAATGGACGCCACTCATAACCC
TGAGTTCACTACAATCGAGGCTTATCAGGCTTATGCAGACTTTGAAGATATCATGGACTTGACAGAAGGAATTATCCAAA
GTGCAGCAAAAGCTGTCACAGATGCTGAAAGTATTCCTTATCAAGGTACTGAAATCTTTATCGGTCGCAAATTTGCACGT
AAACACATGCTAGAAGCCATTAAAGAACAAACTGGCATTGATTTCTGGAAAGATATGACTCTCGAAGAAGCGACTGCACT
AGCTAAGGAACATCATGTGACGGTTGAAAAGCATTTTACAGTCGGTCATATTATCAATGCTTTCTTTGAAGATTTTGTTG
AGGATACCTTGATTCAACCTACATTTATCTATGGGCATCCAGTTGAAGTCTCGCCTCTTGCTAAGAAAAATGCAGATGAC
CCACGCTTTACAGACCGTTTTGAACTCTTTATCGTTGGACGCGAATTTGCCAACGCCTTTACTGAGCTGAATGACCCAAT
CGACCAATTATCGCGTTTTGAAGCGCAAGCCAAAGCTAAGGAACTCGGAGATGACGAAGCAACCGGTATCGACTACGACT
ATGTAGAAGCTCTTGAATACGGTATGCCACCAACTGGCGGCCTCGGAATTGGAATTGACCGCTTGATTATGCTGTTGACA
GATGTCACTTCTATCCGTGATGTATTGCTTTTCCCTACGATGAAGTAA

Protein sequence :
MTTEHIEELNDQQLIRREKMAALAEQGIDPFGKRFERTADSAQLKEKYSDKTKEELHELAETATIAGRLMTKRGKGKVGF
AHIQDREGQIQIYVRKDTVGEENYQIFKKADIGDFLGIEGEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETI
YRKRYLDLISNRESFERFVTRSRIVSEIRRYLDNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKR
LIVGGMERVYEMGRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESIPYQGTEIFIGRKFAR
KHMLEAIKEQTGIDFWKDMTLEEATALAKEHHVTVEKHFTVGHIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNADD
PRFTDRFELFIVGREFANAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLIMLLT
DVTSIRDVLLFPTMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 9e-112 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_008501132.1 lysyl-tRNA synthetase VFG1668 Protein 5e-112 49