Gene Information

Name : ermTR (SANR_1363)
Accession : YP_008501068.1
Strain : Streptococcus anginosus C238
Genome accession: NC_022239
Putative virulence/resistance : Resistance
Product : rRNA methyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.1.1.-
Position : 1435717 - 1436448 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence :
ATGAAACAGAAAAACCCGAAAAATACGCAAAATTTCATTACATCTAAAAAGCATGTAAAGGAAATATTAAAATATACGAA
TATCAATAAACAAGATAAAATAATAGAAATTGGGTCAGGAAAAGGACATTTTACCAAGGAACTTGTGGAAATGAGTCAAC
GGGTGAATGCTATAGAGATTGATGAAGGTTTATGTCATTCCACGAAAAAAGCAGTTGAACCTTTTCAGAATATAAAAGTT
ATTCATGAGGATATTTTGAAGTTTAGCTTTCCTAAAAATACAGACTATAAAATATTTGGTAGTATTCCCTACAATATTAG
TACTGATATTGTAAAAAAGATTGCTTTTGATAGTCAAGCGAAATATAGCTACCTTATTGTAGAGAGGGGATTTGCTAAAA
GGTTGCAAAATACCCAACGAGCTTTAGGTTTGCTGTTAATGGTGGAAATGGATATAAAAATTCTTAAAAAAGTGCCACGA
GCATATTTTCACCCTAAGCCTAATGTAGATTCTGTATTGATTGTACTTGAAAGGCATAAACCATTTATTTTAAAGAAGGA
CTACAAAAAGTATAGATTTTTCGTTTATAAATGGGTAAACAGGGAATATCATGTTCTTTTTACTAAAAATCAATTAAGAC
AGGTGCTGAAGCATGCGAATGTTACTGATCTTGATAAATTATCCAATGAACAATTTTTGTCTGTTTTCAATAGTTACAAA
TTATTTCAATAA

Protein sequence :
MKQKNPKNTQNFITSKKHVKEILKYTNINKQDKIIEIGSGKGHFTKELVEMSQRVNAIEIDEGLCHSTKKAVEPFQNIKV
IHEDILKFSFPKNTDYKIFGSIPYNISTDIVKKIAFDSQAKYSYLIVERGFAKRLQNTQRALGLLLMVEMDIKILKKVPR
AYFHPKPNVDSVLIVLERHKPFILKKDYKKYRFFVYKWVNREYHVLFTKNQLRQVLKHANVTDLDKLSNEQFLSVFNSYK
LFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ermA BAC57474.1 rRNA methylase Not tested Type-IIIinv SCCmec Protein 2e-95 81
ermA BAA82205.1 rRNA adenine N-6-methyltransferase Not tested Type-II SCCmec Protein 2e-95 81
ermA1 YP_039522.1 rRNA adenine N-6-methyltransferase 1 Not tested Type-II SCCmec Protein 3e-95 81
ermA NP_370576.1 rRNA methylase Not tested Type-II SCCmec Protein 3e-95 81
ermA NP_373288.1 rRNA methylase Not tested Type-II SCCmec Protein 3e-95 81
ermA-3 YP_190052.1 rRNA adenine N-6-methyltransferase Not tested Type-II SCCmec Protein 3e-95 81
unnamed BAB47663.1 rRNA adenine N-6-methyltransferase Not tested Type-III SCCmec Protein 6e-95 81
unnamed BAC53825.1 rRNA adenine N-6-methyltransferase Not tested SRImec-III and SCCmec-III region Protein 6e-95 81
ermC NP_273130.1 rRNA adenine N-6-methyltransferase Not tested IHT-A Protein 2e-63 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ermTR YP_008501068.1 rRNA methyltransferase NC_009782.5559087.p0 Protein 1e-95 81
ermTR YP_008501068.1 rRNA methyltransferase NC_002758.1121630.p0 Protein 1e-95 81
ermTR YP_008501068.1 rRNA methyltransferase NC_002952.2859615.p0 Protein 1e-95 81
ermTR YP_008501068.1 rRNA methyltransferase NC_002745.1123579.p0 Protein 1e-95 81
ermTR YP_008501068.1 rRNA methyltransferase NC_002745.1124852.p0 Protein 1e-95 81
ermTR YP_008501068.1 rRNA methyltransferase NC_009782.5559229.p0 Protein 1e-95 81
ermTR YP_008501068.1 rRNA methyltransferase NC_002758.1120012.p0 Protein 1e-95 81
ermTR YP_008501068.1 rRNA methyltransferase NC_002952.2859614.p0 Protein 1e-95 81
ermTR YP_008501068.1 rRNA methyltransferase NC_002745.1122822.p0 Protein 1e-95 81
ermTR YP_008501068.1 rRNA methyltransferase NC_002745.1124324.p0 Protein 1e-95 81
ermTR YP_008501068.1 rRNA methyltransferase NC_002745.1125313.p0 Protein 1e-95 81
ermTR YP_008501068.1 rRNA methyltransferase AJ313523.1.orf0.gene Protein 6e-82 71
ermTR YP_008501068.1 rRNA methyltransferase M64090.gene.p01 Protein 6e-65 61
ermTR YP_008501068.1 rRNA methyltransferase NC_010685.6295744.p0 Protein 1e-63 59
ermTR YP_008501068.1 rRNA methyltransferase NC_007209.3523503.p0 Protein 1e-63 59
ermTR YP_008501068.1 rRNA methyltransferase NC_007792.3912746.p0 Protein 4e-63 59
ermTR YP_008501068.1 rRNA methyltransferase NC_010686.6295746.p0 Protein 1e-63 59
ermTR YP_008501068.1 rRNA methyltransferase V01278.gene.p01 Protein 1e-63 59
ermTR YP_008501068.1 rRNA methyltransferase M15332.gene.p01 Protein 5e-63 57
ermTR YP_008501068.1 rRNA methyltransferase AM180355.1.gene2259. Protein 3e-50 49
ermTR YP_008501068.1 rRNA methyltransferase AM903082.gene3.p01 Protein 4e-51 49
ermTR YP_008501068.1 rRNA methyltransferase AM180355.1.gene2254. Protein 3e-50 49
ermTR YP_008501068.1 rRNA methyltransferase AM410044.gene14.p01 Protein 4e-51 49