Gene Information

Name : shlB2 (VAPA_2c09540)
Accession : YP_008493970.1
Strain :
Genome accession: NC_022234
Putative virulence/resistance : Unknown
Product : putative hemolysin transporter protein ShlB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 974475 - 976211 bp
Length : 1737 bp
Strand : -
Note : -

DNA sequence :
TTGAAAACAAACCCGTGTGCCATGCTGGCCGGTGTGCTGCTGGGCGGCCCCTTGTTGGCTCAAGCGCAGGTCTCCAGCAC
GCCGCAACCCTTTGTCGAACAGCAACGCCAGCAGGAACGCGAACGCGCCCTGCGCGAGCAGAACGAGCGCACGGTGGACC
AGCGGCTGCAGGCCGCGCCACCCGCGCCTACCCAGCGCATTCCCGAATCCGAAGCCCCGTGCTTTCGCATCGACCGCGTA
TTACTGGTCGGCGAGCAGGCCGAGGCCTTCCAGTGGGCGGTGGCCGATCTGTCCGGCCCCGAGGGCAACGATTCACCACT
GGGCCGGTGCCTCGGCACGCCGGGTGTGAACGTGGTGCTCGCCCGCGCCCAGCAGGCGGCGATTGCGCGCGGCTTTGTCA
CCACCCGGGTACTTGCTGCGCCGCAGGACCTGTCCACCGGCACCCTGACCTTGTCGCTGGTGCCCGGGCGCATCGCGGCC
ATCCGGACCACGCCGGATTCTTCCTCCACGCTGCTGGGCAGCGGCGCCTTGCTGGGGTCCGCCATCCCCGCCCGCCCGGG
CGATTTGCTGAACCTGCGCGACATCGAGCAGGGCCTGGAGAACCTCAAGCGCGCCCCCACGGCCGAGGCCGACATCCAGA
TCGAACCCTCCACCGCACCCGATGCCAAGCCGGGCGACAGCGACCTGGTGGTCAAGTACGTGCAGGCCAAGAAGTGGCGC
CTCACCCTGAGCCTGGACGACAGCGGCACCGAGGCCACGGGCCGCTACCAGGCCGGCGCCACGCTGTCGCTGGACAACCC
CTTCGGGCTGAACGACCTGTTCTATGTCAGCGCCAACCACAACCTCAACGGCCACGTCTTCAGCGACCCGGCCAAGGGCA
CCGAAGGCCAGACGGTGCACTACTCGCTGCCCTACGGCTACTGGATGCTGGGCCTCACGGCCTCCAACAGCCAGTACCAC
CAGCGCGTGGCCGGGCTGAACCAGGACTATGTCTACGCGGGCAAGACCAACAACGCCGAGGTCAAGCTCTCGCGCCTGCT
GTACCGCGACCAGAGCCGCAAGACCACGCTGGCGCTGAAGGGCTTCCGGCGCGAATCGCGCAACTTCGTGGACGACACCG
AGGTCGAGGTGCAGCACCGGGTGGTGGGGGGCTGGGAGCTCGGGCTGAACCACAAGGAGTTCATCGGCGACGCGACGCTG
GAAGGCACGCTCGCCTACAAGCATGGCACGGGCGGCTTCGGGTCGATCGCAGCGCCGGAGGAGACGTTCGGCGAGGGCAC
CTCGCGCATGCGGCTGTACACGGCCGAGCTGAGCCTGAACGCGCCGTTCAAGCTGGGCGAGCAGAAGCTGCGCTACTCGG
GCCTGGTCCGCGCGCAATGGAACCGCACGCCGCTGATGTCACAGGACAGGTTTGCCATCGGCGGGCGCTACACAGTGCGC
GGCTTCGACGGCGAGACGAGCCTGATGGGCGAGCGCGGCTGGCTGATCCGCAACGACATCGGCTGGGCCATGGGGCAGAG
CGGGGCGGAGCTGTATGTCGGTGCCGACTACGGGCATGTCGGCGGGCGCTCCACCGCGGACCTGCCGGGCCGCAGCCTCG
CGGGCGCGGTCATCGGGGTGCGGGGGCAGTGGAGCAAGCTCAGCTACGACTTCTTCATGGGGGCGCCGATCCGCAAGCCT
GAGGGGTACCGCACGGCCAAGACCACCTTCGGCTTCAATCTCAACGCAAGTTTCTGA

Protein sequence :
MKTNPCAMLAGVLLGGPLLAQAQVSSTPQPFVEQQRQQERERALREQNERTVDQRLQAAPPAPTQRIPESEAPCFRIDRV
LLVGEQAEAFQWAVADLSGPEGNDSPLGRCLGTPGVNVVLARAQQAAIARGFVTTRVLAAPQDLSTGTLTLSLVPGRIAA
IRTTPDSSSTLLGSGALLGSAIPARPGDLLNLRDIEQGLENLKRAPTAEADIQIEPSTAPDAKPGDSDLVVKYVQAKKWR
LTLSLDDSGTEATGRYQAGATLSLDNPFGLNDLFYVSANHNLNGHVFSDPAKGTEGQTVHYSLPYGYWMLGLTASNSQYH
QRVAGLNQDYVYAGKTNNAEVKLSRLLYRDQSRKTTLALKGFRRESRNFVDDTEVEVQHRVVGGWELGLNHKEFIGDATL
EGTLAYKHGTGGFGSIAAPEETFGEGTSRMRLYTAELSLNAPFKLGEQKLRYSGLVRAQWNRTPLMSQDRFAIGGRYTVR
GFDGETSLMGERGWLIRNDIGWAMGQSGAELYVGADYGHVGGRSTADLPGRSLAGAVIGVRGQWSKLSYDFFMGAPIRKP
EGYRTAKTTFGFNLNASF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB1762 NP_274762.1 hemolysin activation protein HecB Not tested IHT-C Protein 3e-100 46
S1 AAQ19124.1 putative hemolysin activator HlyB Not tested PAI I CL3 Protein 2e-101 45