Gene Information

Name : VAPA_2c09500 (VAPA_2c09500)
Accession : YP_008493966.1
Strain :
Genome accession: NC_022234
Putative virulence/resistance : Unknown
Product : putative transposase, IS66 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 971180 - 972748 bp
Length : 1569 bp
Strand : +
Note : -

DNA sequence :
GTGCCGAACACCGCCCACGCACCCCACACCGTCGACTCGCTGCTGCGCGTCGTGCAGGCGCGTGACGCGGAAGTGGCCCT
GCTCAAGCTGCTCGTGGACAAGCTCAAGGTGCAGCTGCTGCGCCAGGTCCGGGCCCGCTTCGGTGCCTCCAGCGAACAGC
TGGACGACCCGCAGATCGCGTTGATCGCTGACTTGCCGATACACGAGCTTGCGCCGATCGCGCAGACCCCCAAGGCGCCA
GCCGCCAACAGCGAAGGCTTCGACCGCAGCCTGCCCGCGCACCTGCCGCGCGAGAACCATGTGTACCGGCCCGAGACTTC
GGATGCACGGCGCGACGCCGCCGGCCAGGCCTGTGGCTGCAGCGCGTGCGGCGGCCGGTTGCGCCAGATCGGCCAGGACG
TCTCCGAACAACTGGAATACGTGCCCTCGCGCTTCAAGGTGATCCGCCACGTGCGCCCCAAGCTCGCCTGCATGGCGTGC
GAATCCATCTTCCAGGCGCCAGCGCCGAGCCGGCCCATCGCACGCGGCGTGGCCGGTCCCGGGCTGCTGGCCCACGTGCT
GGTCGCCAAGTATTGCGACCACCAACCTCTCTACCGCCAGAGCCGCATCTACGCCCGCGAAGGTGTGCCCATTGAGCGCT
CCACCATGGCCGGCTGGGTCGGTCAGAGCGAGAAGCTGCTGGACCCACTGGTTGCCGCGCTCGGGCGCTACGTGCTGGCG
GGCTCCAAGCTGCATGCCGACGACACGCCCGTGGCGGTGCTCTCGCCCGGGCGCGGCCGGACCAAGACCGGAAGGCTCTG
GGTCTACGTGCGTGACGATCGGTCCTCGGCGAGCACCGACGCGCCGGCCGCGTGGTTGCGCTGCTCGCCCGACCGCAAGG
GCGAGCATCCCCAGGCGCACCTGAAGGACTTCAAGGGGGTCTTGCAGGCCGATGCGTATGCGGGCTTCGCCAAGCTCTAC
GCCGGCGGCGCCATCATCGAGGCTTCATGTTGGGCCCATGCGCGCAGACCGTTCTGGGATCTGCACGAGAGCCAGGGTCG
GGCGCCGGGCTCGGTTGCCGAACAAGCGCTGCGGCGCATCGGTGCGCTGTATGCGATCGAGGCCGACATACGGGGGCGCC
CTCCGGCCGAGCGATGCCGGGAGCGCCAGGCGCGGGCCGGTCCGTTGCTTGAGGAACTGTTCGCCTGGTTGAGAGGAATG
CTCGGGCAGGTGTCTGCCAAGTCGGAGCTCGCGCGCGCCATCGGCTACACGCTCACGCGGCTCGGATCGCTGACGCGCTA
CCGCGACGACGGGCGCATCGAGATCGACAACAACGCCGCCGAGCGCGCGCTGCGCGGCGTCGGCCTGGGCCGAAAGAACT
TCATGTTCATGGGCTCGGACGCCGGGGGCGAGCGCGCTGCGGCCATCTACAGCCTGGTGGAATCGGCCAAGTTGAACGGG
CTCGACCCCGAGGCCTACCTGCGCGATGTGCTCGGGCGCATCGCGGACCATCCGATCAACCGCATCGACGAGTTGCTGCC
GTGGAACATCGGTGGGCCGCAGCACATCGAGCAGCGACTGGCCGCCTGA

Protein sequence :
MPNTAHAPHTVDSLLRVVQARDAEVALLKLLVDKLKVQLLRQVRARFGASSEQLDDPQIALIADLPIHELAPIAQTPKAP
AANSEGFDRSLPAHLPRENHVYRPETSDARRDAAGQACGCSACGGRLRQIGQDVSEQLEYVPSRFKVIRHVRPKLACMAC
ESIFQAPAPSRPIARGVAGPGLLAHVLVAKYCDHQPLYRQSRIYAREGVPIERSTMAGWVGQSEKLLDPLVAALGRYVLA
GSKLHADDTPVAVLSPGRGRTKTGRLWVYVRDDRSSASTDAPAAWLRCSPDRKGEHPQAHLKDFKGVLQADAYAGFAKLY
AGGAIIEASCWAHARRPFWDLHESQGRAPGSVAEQALRRIGALYAIEADIRGRPPAERCRERQARAGPLLEELFAWLRGM
LGQVSAKSELARAIGYTLTRLGSLTRYRDDGRIEIDNNAAERALRGVGLGRKNFMFMGSDAGGERAAAIYSLVESAKLNG
LDPEAYLRDVLGRIADHPINRIDELLPWNIGGPQHIEQRLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-107 60
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 4e-111 60
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 2e-112 60
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 4e-111 60
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 4e-111 60
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 7e-112 60
tnp AEA34686.1 transposase Not tested Not named Protein 9e-112 60
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 7e-112 60
unnamed AAC31494.1 L0015 Not tested LEE Protein 5e-112 60
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 3e-112 60
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 5e-112 60
unnamed AAL57570.1 unknown Not tested LEE Protein 3e-112 60
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 1e-111 60
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 8e-115 59
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-98 53
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 2e-82 52
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 4e-101 52
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 5e-103 52
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 5e-103 52
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-89 47
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 1e-89 47
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 2e-72 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAPA_2c09500 YP_008493966.1 putative transposase, IS66 family VFG1700 Protein 9e-108 60
VAPA_2c09500 YP_008493966.1 putative transposase, IS66 family VFG0793 Protein 3e-112 60
VAPA_2c09500 YP_008493966.1 putative transposase, IS66 family VFG1513 Protein 9e-83 52
VAPA_2c09500 YP_008493966.1 putative transposase, IS66 family VFG1736 Protein 4e-78 50