Gene Information

Name : VAPA_2c04630 (VAPA_2c04630)
Accession : YP_008493483.1
Strain :
Genome accession: NC_022234
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 465530 - 466249 bp
Length : 720 bp
Strand : +
Note : -

DNA sequence :
ATGCCTGTCGATCCACTGCTTCCCGTCTTCCGGGCCCGCGGCCTCGGAAAGACCTATCGCGCGGGCGACGTCGACGTCGT
TGCGCTGCGCGATGTCGATCTGGACGTCATGGCTGGCGAGTTCGTGGTTCTGCTCGGACCTTCCGGCAGCGGCAAGTCGA
CGCTGCTCAATATCCTGGGCGGCCTCGAGGTGGCCAGCACCGGCAGCCTGCACTATTTCGAGCAGGACTTGATCGCTGCC
GGCGACAGGGCACTCACGCGCTACCGGCGCGAGCACGTGGGGTTCGTGTTCCAGTTCTACAACCTCATTCCCAGCCTCAC
GGCCCATGAGAACGTGGCACTGGTGACGGACATCGCGACCGATCCGATGCCGATCGACGACGCGCTGGAGCGCGTGGGCC
TGTCGGCGCGGCGCGACCATTTTCCTTCCCAGCTCTCGGGCGGCGAGCAGCAGCGCGTGGCGATCGCCAGGGCCATCGTC
AAGCGGCCCCGGGTGCTTCTGTGCGACGAACCCACCGGCGCGCTGGACTATGCGACGGGCAAGCTGGTGCTCGACGTGAT
TGCCCGCGTCAACCGCGAGCTCGGCACCACCACGCTGGTGATCACGCACAACGCCTCGATCGCAGGCATGGCCGACCGCG
TGATCTCGCTCGGCGATGGCCGGGTGCAGAAGATCGAGCGCAATGCGCATCGACTCGCGCCGGCGGAACTGTCCTGGTAG

Protein sequence :
MPVDPLLPVFRARGLGKTYRAGDVDVVALRDVDLDVMAGEFVVLLGPSGSGKSTLLNILGGLEVASTGSLHYFEQDLIAA
GDRALTRYRREHVGFVFQFYNLIPSLTAHENVALVTDIATDPMPIDDALERVGLSARRDHFPSQLSGGEQQRVAIARAIV
KRPRVLLCDEPTGALDYATGKLVLDVIARVNRELGTTTLVITHNASIAGMADRVISLGDGRVQKIERNAHRLAPAELSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-28 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-16 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAPA_2c04630 YP_008493483.1 ABC transporter, ATP-binding protein NC_012469.1.7685735. Protein 8e-47 52
VAPA_2c04630 YP_008493483.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 1e-24 43
VAPA_2c04630 YP_008493483.1 ABC transporter, ATP-binding protein NC_012469.1.7686946. Protein 8e-25 42
VAPA_2c04630 YP_008493483.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 2e-32 42
VAPA_2c04630 YP_008493483.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 5e-33 41