Gene Information

Name : VAPA_2c13230 (VAPA_2c13230)
Accession : YP_008494335.1
Strain :
Genome accession: NC_022234
Putative virulence/resistance : Virulence
Product : type IV secretion system VirB11-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1343064 - 1344212 bp
Length : 1149 bp
Strand : -
Note : -

DNA sequence :
ATGCGCTTCGAACCGAACCGGCCATCCCTTGATGGCGAGCCCGGCGCCGCCGCAAGCGACCGGCGGCCGGCGCGGGCGCA
CGCGCATGACGAAGCCTCCGCAGAGCCGCCGTCGTCGCTTGCTCTCTTTCTCGGTCCGCTCGGCCACTTATTGGGTGATC
CCGCGGTGACCGAGATCTGCATCAACGAGCCCGGTGCAGCCTTCGTGGAACGGCAGTCCGGCTGGACACGCGAGGCGTTG
CCGTTCGCGACCTTCGACTGGTGCATGTCCATCGCCAAGCTCGTGGCCAACTTCACGCGACAGCGCATCTCGGCCAACGA
GCCGCTCCTGTCCGCCACCCTCCCGGGCAGCGAAAGAATCCAGATCGTGCTGCCACCCGCAACGCTGGACCAGACCGTCT
CGATCACGATTCGGCGCCCCTCGAACACGCTCTGGACCCTCGAAGAGCTGGAGAATTTGCACATCTTCGAGACCACGCGC
AGTGCTCCCGCGACTCTGGCGCGGCAATCTGAACTGGCGCCCCTGCCACCCGAAGACCGGGAGCTGACGGACTTCCTCGC
ACGTCGGCAATTCGTGCCCTTCCTGCGACGCGCCGTCCAGCTCCGCAAGAACATCCTACTGTCCGGCGCCACCGGCTCCG
GCAAGACCACGGTCGGCAAGGCGCTGATCCTCGAGGTGCCGTCCGAGGACCGCCTGATCACGATCGAGGACGTGAAGGAG
CTGTCGCTGCGCAACCAGCCCAACCACGTGAGGCTCTTCTATTCGCAAGGCGCCCAGGGGCAGGCCGAGGTCACGCCCGG
CCAACTGCTCGCCAGCGCCAAACGGCAACGCCCCGATCGGGTGTTCGTGTCCGAGCTTCGCACCGGCGAGGAGGTTTACG
ACTATCTGGTGTCCGTGAACACCGGCCACCCGGGCTCGATCACCAGCGTGCACGCCGACAGCGCGGAGATGGCCTTCGTG
GCGCTGGCGCAGCTGATGAAGCGCAGTCAGGCGGGCCACGGCATGACCACGCGCGACGGCGTGGAACTGGCCCAGATGAG
CGTGGACATCGTCGTGCAGTGCGCGCGAGAGCGCAGGGACGGCCTGCTGCGGCGCATCGTGCGGGAGATCTGGTATGACC
CTGGCACCAAGATCCGAAGGCTTGCCTAG

Protein sequence :
MRFEPNRPSLDGEPGAAASDRRPARAHAHDEASAEPPSSLALFLGPLGHLLGDPAVTEICINEPGAAFVERQSGWTREAL
PFATFDWCMSIAKLVANFTRQRISANEPLLSATLPGSERIQIVLPPATLDQTVSITIRRPSNTLWTLEELENLHIFETTR
SAPATLARQSELAPLPPEDRELTDFLARRQFVPFLRRAVQLRKNILLSGATGSGKTTVGKALILEVPSEDRLITIEDVKE
LSLRNQPNHVRLFYSQGAQGQAEVTPGQLLASAKRQRPDRVFVSELRTGEEVYDYLVSVNTGHPGSITSVHADSAEMAFV
ALAQLMKRSQAGHGMTTRDGVELAQMSVDIVVQCARERRDGLLRRIVREIWYDPGTKIRRLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB11 YP_001610351.1 VblB11 protein Virulence Not named Protein 4e-53 45
virB11 YP_001610007.1 VirB11 protein Virulence Not named Protein 4e-51 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAPA_2c13230 YP_008494335.1 type IV secretion system VirB11-like protein VFG2240 Protein 6e-52 46
VAPA_2c13230 YP_008494335.1 type IV secretion system VirB11-like protein VFG2218 Protein 1e-47 43