|
Name : VAPA_2c12140 (VAPA_2c12140) Accession : YP_008494228.1 Strain : Genome accession: NC_022234 Putative virulence/resistance : Unknown Product : putative transposase, IS4 family Function : - COG functional category : - COG ID : - EC number : - Position : 1239299 - 1240765 bp Length : 1467 bp Strand : + Note : - DNA sequence : ATGAAGCGATTCATCGAAGGCGAAGACCGACAGCAGGTCGCGTTGTTGCCGGAATGTCTTGATGACTATATCGGCGAAGA CAACCCGGTGCGCGTTGTCGACGTCTTTGTCGAGGAACTGGATCTTCAGGCACTCGGCTTCAAAGGCGCAGACCCCGCTG CCACCGGTCGGCCTGCGTACCACCCGGCGGTGCTGCTCAAGCTCTACATCTACGGCTACCTGAACCGCATCCAGTCCAGC CGGCGTCTGGAGCGCGAGGCCCAGCGCAACGTCGAACTGATGTGGCTCACTGGCCGGCTTGCCCCGGACTTCAAGACCAT TGCCGACTTCCGTCACGACAACGGGGCGGGCATCCGCAACGTCTGCAAGCGCTTCGTGAGCATGTGCCGGGAGCTCAAGC TGTTCACGCAGGCCATCGTGGCCATCGATGGCAGCAAATTCAAGGCGGTCAACAGCCGGGACCGCAACGTCACGCCAGCC AAGATCGATGCGCGCCAGCGGCAGATCGAGCAGAGCATCCAGCGCTACCTCGACGCGCTGGAGACCGCCGACCGCACGCA GCCCGCGCAGGTCGAGGCCAAGACCGAGCGGCTGCAGGACAAGATCAAGAGATTGCGCGAGCAGATGCGCCAGCTCGATG AGACCAAGGAACAGCTGAAGCACGAACCCGATGGCCAGCGCTCCACCACCGATCCCGATTCACGCTCGATGAACTCACAA GCCAAGGGCTCGGGCCTGGTGGGCTACAACGTGCAAGCGGCCGTTGATGCCAAGCACCATCTGATCATTGCCCACGAGGT GACGAACATCGGCAATGACCGAGCCCAGCTAAGCAAGATGGCGCAGGCCGCTCGCGAGGCGATGGGTAAAAGCAGGGTGC GCGTCTTCGCTGACCGCGGGTACTTCAACGGCACCGAACTCAAGGCCTGCGAAGACGTTGGCATCACAACCTTCGTGCCC AAGCCGATGACCTCGGGCGCCAAGGCCCAGGGGCGCTTCGACAAGAGCGACTTCATCTATATCGCGAAAGATGACGAGTA CCAGTGCCCTGCAGGACAACGACTGCGGTGGCATCAGACCACCACGGAACGGGAAATGAACCTGCGGGCTTACTGGACGT CGGTGTGCCCGCAGTGTCCCCTCAAGGCGCAATGCACCACTGGCAAAGAACGACGCGTGAAGCGTTGGGAGCACGAAGCA GTGCTGGAGCGCGTTCAGCAGCGGCTTGATCGCAAGCCCGATTCCATGACGCTGCGAAGAAGTACCGTGGAGCATGTGTT CGGGACCCTCAAGCACTGGATGGGCTGGACGCACTTCCTGACGAAGACACGTGGAGAATGTCGGCACCGAGATGAGCTTG CATGTGCTGGCTTACAACCTCAAGCGGGTGATCGCCATCCTGGGCATGACAAGAACGATGAAGGCGATCAAGTTGGCGGG GGCGTGAGCGCCTTTAACGACGGCTGA Protein sequence : MKRFIEGEDRQQVALLPECLDDYIGEDNPVRVVDVFVEELDLQALGFKGADPAATGRPAYHPAVLLKLYIYGYLNRIQSS RRLEREAQRNVELMWLTGRLAPDFKTIADFRHDNGAGIRNVCKRFVSMCRELKLFTQAIVAIDGSKFKAVNSRDRNVTPA KIDARQRQIEQSIQRYLDALETADRTQPAQVEAKTERLQDKIKRLREQMRQLDETKEQLKHEPDGQRSTTDPDSRSMNSQ AKGSGLVGYNVQAAVDAKHHLIIAHEVTNIGNDRAQLSKMAQAAREAMGKSRVRVFADRGYFNGTELKACEDVGITTFVP KPMTSGAKAQGRFDKSDFIYIAKDDEYQCPAGQRLRWHQTTTEREMNLRAYWTSVCPQCPLKAQCTTGKERRVKRWEHEA VLERVQQRLDRKPDSMTLRRSTVEHVFGTLKHWMGWTHFLTKTRGECRHRDELACAGLQPQAGDRHPGHDKNDEGDQVGG GVSAFNDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | ACY75519.1 | transposase | Not tested | Tn6060 | Protein | 2e-149 | 66 |
| tnpA | ACY75536.1 | transposase | Not tested | Tn6060 | Protein | 2e-149 | 66 |
| unnamed | CAD91340.1 | hypothetical protein | Not tested | Not named | Protein | 2e-149 | 66 |
| ORF SG74 | AAN62296.1 | transposase domain protein | Not tested | PAGI-3(SG) | Protein | 3e-149 | 66 |
