Gene Information

Name : SAKOR_00048 (SAKOR_00048)
Accession : YP_008490232.1
Strain : Staphylococcus aureus CN1
Genome accession: NC_022226
Putative virulence/resistance : Unknown
Product : Site-specific recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 52847 - 54214 bp
Length : 1368 bp
Strand : -
Note : -

DNA sequence :
GTGAAAGGAGGAGCCGATATGAAACAAGTCATAGGCTATTTACGTCAAAGTACGATGAAACAACAATCTCTTGCAGCACA
GAAACAAGCTATCGAAGCAATAGCCGAAAAACATCATATTCAACATATCAACTTTTATAGCGACAAACAATCAGGACGCA
AAGATAATCGTAGTGGGTATCGACAATTAACACAATTAATTCAACAAGGACAATGTGACATATTATGCTGTTATCGTCTT
AATAGGTTGCATCGTAATCTGAAAAATGCATTAAAACTCATCAAATTATGTCAAACGTACCATGTTCATATCTTAAGCGT
ACATGATGGTTACTTTGATATGGATCAAGCTTTCGACCGACTCAAGCTTAATATCTTCATCAGTTTAGCCGAACTTGAAT
CGGATAACATTGGAGAACAAGTCAGAAATGGGCTTCAAGAAAAAGCAAAGCAAGGTCGATTGATTACAACACATGCACCT
TTTGGTTACGATTATCACAACGGAACATTCATCATCAATCAAAATGAGTCACCAACGGTAAAGGCTGTATTCAATTATTA
CATTAAAGGCCATGGTTATAAGAAAATTGCACAGTTATTAGAAGAAGATAACACGTATATCAATCGACAACCCTATCAAG
TTCGTAACATTATCATCAATCCTAATTATTGTGGTCGTGTCAACAATCAATATGGCCAATTCGACAATATGTTTCCTTCT
ATTGTTTCCACAAGTATATATGAGCAAGCGCAGAGACTTCGATCGCAAAAACAAACCAAACAGACATCTTCGGATAATCA
ACTCAAACAAAAAATCAAATGCCCATGTTGTAATGCAACACTTACAAATATGACCGTTAGAAAAAAGAATCATATATTAC
GTTACTACGTCTGTCCTAAAAATATGAATGCTTCACGCTTTGTCTGTGATTTCAAAGGCATCAATGCACAGACATTGGAA
GATAAAGTATTAAAAGTGTGCCAAGACTTTTATCAAGACCAACATATCTACGTAAAAATTAAAAATGCGATTGACAAACG
CATCAAAAGACAAAGAAACATAGAAAAGCATCACACATTGACTCAAGAACAACTGATAGAAAAGTTGGCACAAGGCATCA
TCGATGCAGAAACGTTTAGAAAACAAATGCAATCATTACATCAACAACCACAACGCATCACATCCATCAGTGAGCATCAA
ATACAACACACCATTCAAAATATTATTCAAAAACGTTTCACGTTAAACATATTGTACCCCTATATTGAAACCATTCACAT
TGCGAAAGATAAAAATCTTATAGGAATCTATTTCAAAAATGAACCACTCAATATCGTCAATCAAACCATGCAATCATCAA
TTGCATAA

Protein sequence :
MKGGADMKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQLTQLIQQGQCDILCCYRL
NRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAP
FGYDYHNGTFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPS
IVSTSIYEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTVRKKNHILRYYVCPKNMNASRFVCDFKGINAQTLE
DKVLKVCQDFYQDQHIYVKIKNAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFRKQMQSLHQQPQRITSISEHQ
IQHTIQNIIQKRFTLNILYPYIETIHIAKDKNLIGIYFKNEPLNIVNQTMQSSIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccrA2 BAC67560.1 cassette chromosome recombinase A2 Not tested Type-IVc SCCmec Protein 0.0 96
SE0037 NP_763592.1 cassette chromosome recombinase A Not tested SCCpbp4 Protein 0.0 96
ccrA BAA82194.1 site-specific recombinase Not tested Type-II SCCmec Protein 0.0 96
ccrA2 DAA01834.1 cassette chromosome recombinase A type 2 Not tested SCCpbp4 Protein 0.0 96
SAMSHR1132_00410 YP_005324564.1 site-specific recombinase Not tested Type-IIIinv SCCmec Protein 0.0 96
ccrA YP_492758.1 cassette chromosome recombinase A Not tested Type-IV SCCmec Protein 0.0 96
ccrA NP_370586.1 cassette chromosome recombinase A Not tested Type-II SCCmec Protein 0.0 96
ccrA BAB72108.1 cassette chromosome recombinase A Not tested Type-IVa SCCmec Protein 0.0 96
ccrA NP_373298.1 cassette chromosome recombinase A Not tested Type-II SCCmec Protein 0.0 96
ccrA BAB72127.1 cassette chromosome recombinase A Not tested Type-IVb SCCmec Protein 0.0 95
ccrA NP_644854.1 cassette chromosome recombinase A Not tested Type-IV SCCmec Protein 0.0 94
ccrA YP_039531.1 site-specific recombinase Not tested Type-II SCCmec Protein 0.0 93
SERP2498 YP_190040.1 cassette chromosome recombinase A Not tested Type-II SCCmec Protein 0.0 93
ccrA1 YP_005754052.1 site-specific recombinase CcrA1 Not tested Type-XI SCCmec Protein 2e-163 78
ccrA1 BAB83486.1 site-specific recombinase Not tested SCC 12263 Protein 3e-162 76
ccrA1 YP_042166.1 site-specific recombinase Not tested SCC476 Protein 1e-161 76
SSP0036 YP_300126.1 cassette chromosome recombinase A Not tested SCC15305RM Protein 2e-162 76
ccrA1 BAA86648.1 cassette chromosome recombinase A1 Not tested Type-I SCCmec Protein 8e-162 75
ccrA1 YP_184952.1 cassette chromosome recombinase A1 Not tested Type-I SCCmec Protein 1e-161 75
ccrA3 BAB47596.1 cassette chromosome recombinase A3 Not tested Type-III SCCmec Protein 5e-155 74
ccrA3 BAB46971.1 cassette chromosome recombinase A3 Not tested Type-IIIinv SCCmec Protein 5e-155 74
ccrA4 DAA01836.1 cassette chromosome recombinase A type 4 Not tested SCCpbp4 Protein 8e-107 50
SE0057 NP_763612.1 cassette chromosome recombinase A Not tested SCCpbp4 Protein 1e-106 50