Gene Information

Name : N175_03160 (N175_03160)
Accession : YP_008487095.1
Strain :
Genome accession: NC_022223
Putative virulence/resistance : Unknown
Product : hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 647249 - 649024 bp
Length : 1776 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGATTATGCTAGCCAGTCCTTTTCGTTTACCGCGGCACACCCCATTTGGCGTCGCAGAATCGATTGTTGAATGGGCCTC
TGGGCTTGCAACACTGGATAAACTGTATCAGCAGCGTCCTGCCAAACCCTCTTGCTTTGAGTTTATGCGCTACACGCTAG
CGGCACTCAATATCGAATATCGCCTTGCTTTGGGCAGCATCGATAACATTCCACAAACAGGGCCGGTGGTGATCGTCGCT
AACCACCCGCTGGGCGCAATTGAAGGGGTGATATTAGCCGATTTAATTGGTTCAGTGCGCACCGATATTAAAGTACTGGC
GAATCAGTTGCTAAAGCGCCTACCTGAAATTAGTGAACTCTTTATCGGTGTCGATGTGTTCAATAGTAAAAGTGCTCGCA
GCACCAATGCGCAAGCCATTCGAGATGCGAACCTTCATTTGGCTCAAGGTGGCTTATTGATTATCTTCCCCGCTGGTGAG
GTATCTACTTACCCCAAAGGATCGCAAACACTGTCGGATATCGAATGGAGTCAATCCGTCGCCAAATTTGTTAAACGCGC
CCAAGCCACCACCGTCCCGATCTTTATTAATGGTAAAAATAGCACTCTGTTTTATCAAGCGGGGCGAATTCATCCACTAC
TGCGAACGGCATTGCTCGGCCGCGAGCTACTGAATAAGCAGGCGCACAACATTGAAATTTCCATCGGCAATCCCATCCCC
TATTCTGAAGTGAAAGCATTTGAACAGGAACGAGACATTGTTCATTATCTGCGTCTCAATACCTATTTAATGAGTGCAGC
ACCCACTGCAACGCCATCCTCACCAGAGTTAGTGACATCGCCCCTTCCTATTATTGATGCGCTTATTGTAGAGAAGCTTG
AGCAAGATCTCGCCGCGCTGCCAAGCGAAAGCAAGCTCTTAGAGCAAGGTGATTGGATTGTCTATTGCGCCGCAAGCGAG
CAGTTACCCCACATACTGCAAGAGATTGGTCGAATTCGTGAAGAGAGTTTTCGCGCCGTAGGTGAAGGAAGCGGCTTAGC
TTGTGATCTTGATGAGTATGATCGCCATTACTACCAACTCTTTGTTTGGCACAAGAAAGACCGTCAAATTGTTGGAGCTT
ATCGATTGGGGTTAGTGGATAAACTGATAGCGAAGCAAGGGTTAGCAGGGCTATATTCCCGTAGCTTATTTCAGTATGAT
GAAACCTTCATCAACACACTAGATACCAGTATTGAGCTAGGCCGCTCGGTGGTTTCCTCGAAATACCAGCGCAACCTCAA
CTCACTGTTAATGCTGTGGAAAGGTATTGCTGCGTTTGTCGCGCGTCATCCACAATATACGCACTTGTTTGGCCCAGTAA
GCATTAGCAACGATTACAGCCACACCGCGCGACAATTAATGGCCGCCACACTCTCTATTCATCATTATGATCATGAAAAG
GCAACCTTGGTTTCACCTTCCACTCCACTACGGTGCAATGGGAACACATTTTGGCAAACCAACTTGCTCTCCTCTTTGGC
AAGCATTTCTCTGCTGTCGAAAGTGTTAGCAAAAATGGAAAATGGCAAGGGCCTTCCTGTATTGCTGCGCCAATATTTAG
GGATGAATGGCAAGCTCGTCTGTTTTAATGTCGACCCCGCGTTTAACAATGCGTTAGATGGCTTAATTGTAGTGAACTTG
AAACAAGTTCCGCTGCATACACTGGCAAAATACATGGGTAAGGAGCAGGCCAGCGCTTATTTGAATTCGACACCTTTCAG
TTCAAAGCCCTCATAA

Protein sequence :
MIMLASPFRLPRHTPFGVAESIVEWASGLATLDKLYQQRPAKPSCFEFMRYTLAALNIEYRLALGSIDNIPQTGPVVIVA
NHPLGAIEGVILADLIGSVRTDIKVLANQLLKRLPEISELFIGVDVFNSKSARSTNAQAIRDANLHLAQGGLLIIFPAGE
VSTYPKGSQTLSDIEWSQSVAKFVKRAQATTVPIFINGKNSTLFYQAGRIHPLLRTALLGRELLNKQAHNIEISIGNPIP
YSEVKAFEQERDIVHYLRLNTYLMSAAPTATPSSPELVTSPLPIIDALIVEKLEQDLAALPSESKLLEQGDWIVYCAASE
QLPHILQEIGRIREESFRAVGEGSGLACDLDEYDRHYYQLFVWHKKDRQIVGAYRLGLVDKLIAKQGLAGLYSRSLFQYD
ETFINTLDTSIELGRSVVSSKYQRNLNSLLMLWKGIAAFVARHPQYTHLFGPVSISNDYSHTARQLMAATLSIHHYDHEK
ATLVSPSTPLRCNGNTFWQTNLLSSLASISLLSKVLAKMENGKGLPVLLRQYLGMNGKLVCFNVDPAFNNALDGLIVVNL
KQVPLHTLAKYMGKEQASAYLNSTPFSSKPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0489 NP_230143.1 hemolysin Not tested VSP-2 Protein 2e-153 54