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Name : N175_00235 (N175_00235) Accession : YP_008486551.1 Strain : Genome accession: NC_022223 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 47283 - 49316 bp Length : 2034 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : GTGAAGCATTGGTTAAACAAAACGACGTGGTTATTGATGGGTGGCTTGTTGTCATCGCCGTTAGCCATGGCAAACGATTT TAGTGCCAGCTTTAAAGGCACCGATATTCAAGAATTCATCAATATCGTGGGCCGTAATCTTGAAAAAACAATCATTGTTG ATCCTTCCGTTCGGGGGAAGGTTGATGTCCGCAGCTATGACACACTTAATGAAGAGCAATACTACAGCTTCTTTTTGAAT GTATTGGAAGTGTATGGTTTTGCCGTGGTGGAAATGGACAACGGCGTGCTCAAAGTGATCAAGTCGAAAGATGCCAAAAC GTCTGCGATTCCTGTCGTTGGCGATGAAGGAAAAGAGAACGGTGATAGCGTGATCACGCGCGTTGTTGCGGTGCGGAATG TTTCGGTACGAGAGCTTTCACCTTTGCTGCGCCAGTTGATCGATAACGCAGGAGCGGGCAACGTAGTGCATTATGATCCG GCGAACATTATTTTGATTACAGGTCGTGCTGCGGTCGTCAACCGTTTAGCCGATATCATCAAACGAGTTGACCAAGCTGG TGACAAAGACATCGAGGTTGTGGAACTAAGTAATGCATCTGCCGCTGAAATGGTGCGTATTGTGGAGGCATTAAACAAAA CCACGGATGCCAAAAATACTCCAGAGTTTTTGCAGCCTAAGCTGGTGGCCGATGATCGTACCAATTCGATTTTGATCTCA GGTGATCCTAAAGTCCGTGAACGTCTAAAGCGATTGATCACTCAGCTTGATGTTGAGATGGCAACAAGAGGCAATAACCG CGTCATTTATCTAAAGAATGCGAAAGCGGAAGATTTGGTTGATGTGCTGAAAGGAGTGTCTGACAACTTGCAGGCTGAAA AACAGTCTGGGCAAAAAACGGGGCAAAGTTCACAACGCACCGAAGTGATGATTTCAGCACATGCACCGACCAATTCCTTA ATTGTTACCGCTCCGCAAGACATCATGAAAGAACTAGAAGATGTGGTTGCGCAGTTGGATATTCGTCGCGCTCAGGTATT GATTGAAGCGCTGATTGTTGAAATGGCCGAAGGGGATGGCATCAACTTAGGCGTGCAATGGGGCTCACTCGATAACGGCT CTGTGATTCAGTATGGCAACGCGGGCGCGCCAATCGGTAAGGTAATGATTGGTTTAGAAGAAGCCAAAGATAGCGTTGAG AAAAAACCGATTCGAGATAGCTCAAAAAGCGAAATAAAATACTACGAAGAAACAACGAAGAAAGGGGATTACTCTACTTT GGCGTCAGCGCTCGGTGCGGTCAATGGTGCAGCCATGAGCTTAGTGATGGGCGACTGGACGGCCCTTATCAGCGCCGTGT CGAGTGACTCCAACTCGAACATCTTGTCATCACCGAGTATTACGGTGATGGATAATGAAGAAGCCTCCTTCATCGTGGGC GAAGAGGTGCCTGTTTTGACAGGTTCGAGCGCGGGCGCAAATAACGATAATCCTTTCCAAACCGTAGAACGCAAAGAGGT CGGTATCAAGCTGAAAGTGGTACCACAAATCAACGAAGGCGACTCAGTTCAATTGAAAATTGAGCAGGAGGTATCCAACG TATTAGGAGCGAATGGTGCCGTCGATGTCCGTTTTGCAAAGCGTCAATTAAACACATCGGTCATCATTCAAGACGGGCAA ATGTTAGTTCTGGGGGGGTTGATTGATGAGCGCGCGGTCGAAAGTGAATCCAAAGTCCCACTATTAGGCGATATACCGGT TTTAGGCTATTTGTTCAAATCGACCAGTACCCAAGTTGAGAAGAAAAACCTGATGGTCTTTATTAAGCCGACCATCATTC GTGATGGCATGACGGCCGATGGCATCACTCAGCGTAAGTACAACTACATTCGTGCAGAGCAGCTCTATAACGCTGATCGC GGTTTGAAGTTGATGGCGAACGACAATATTCCTGTGCTGCCTAAGTTTGGCGATGAGCGCACCCATTCTGCGGAAGTACA AGCCTTTATCGAACAAATGGAAAAACAGCAATGA Protein sequence : MKHWLNKTTWLLMGGLLSSPLAMANDFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKVDVRSYDTLNEEQYYSFFLN VLEVYGFAVVEMDNGVLKVIKSKDAKTSAIPVVGDEGKENGDSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDP ANIILITGRAAVVNRLADIIKRVDQAGDKDIEVVELSNASAAEMVRIVEALNKTTDAKNTPEFLQPKLVADDRTNSILIS GDPKVRERLKRLITQLDVEMATRGNNRVIYLKNAKAEDLVDVLKGVSDNLQAEKQSGQKTGQSSQRTEVMISAHAPTNSL IVTAPQDIMKELEDVVAQLDIRRAQVLIEALIVEMAEGDGINLGVQWGSLDNGSVIQYGNAGAPIGKVMIGLEEAKDSVE KKPIRDSSKSEIKYYEETTKKGDYSTLASALGAVNGAAMSLVMGDWTALISAVSSDSNSNILSSPSITVMDNEEASFIVG EEVPVLTGSSAGANNDNPFQTVERKEVGIKLKVVPQINEGDSVQLKIEQEVSNVLGANGAVDVRFAKRQLNTSVIIQDGQ MLVLGGLIDERAVESESKVPLLGDIPVLGYLFKSTSTQVEKKNLMVFIKPTIIRDGMTADGITQRKYNYIRAEQLYNADR GLKLMANDNIPVLPKFGDERTHSAEVQAFIEQMEKQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-164 | 55 |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-156 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| N175_00235 | YP_008486551.1 | general secretion pathway protein D | VFG2047 | Protein | 3e-152 | 53 |
