Gene Information

Name : N175_13210 (N175_13210)
Accession : YP_008489008.1
Strain :
Genome accession: NC_022223
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2802807 - 2803598 bp
Length : 792 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGCTTGGCGTCGCCAGCAGCTGTTTTTACTATACGAGAGTTGTATGCTCTGATGAGACCACCCTGCACGATAGAATTTA
CCGTATTGCAGAGGATTCTGATTTTACTTATGGCAAGCGCCGAATACACCGAGAACTGGTAAAAAGTGATGTAAAGATAG
GTTTAGCAAAAGTATCGAGACTGATGAAAGCCATTGAAATACCAGTTAAGTATCCGAAAAAAAGACATCGTTACAACGAG
GTTGGTGAAGAAAGTATCTATGCACCTAATATATTGAAAAGGCAGTTTACCCCCGAAACTCACAATACTCATTGGGTGAC
GGATGTGACCTATATTCGTTCCCATCAAGGTTGGAGTTACTTGGCATGCGTATTAGATCTAGCAACGAAAGAGGTGGTCG
GATATTCGTTGTCACGCTCCCCTGATACCAATTTAACTTTGGCCGCATTAGACAATGCCATCCAAAAACGACGAGCCGAC
ACAACTCAATTACTGTTGCACTCAGATCAAGGATGTCACTTTAGCTCACGAGCTTATAGGCATAGATTACAAGTGCTAAA
TATTACACAAAGCATGAGTAAACGAGGGTGTTGTTGGGATAATGCTGTGGTGGAACGTTTTTTTCGTTCTTTAAAATCAG
AGCGTTTAAACGAATTAAGCTTTATCAATCATCAGTCAATCGTAATGGAGGTAGAGAGCTACATTCGTTTTTACAACTAT
AAACGAAGTCATAGTGGGATTGATTATTTAACGCCAAATGAAAAATACCAACAAATGCAAAAAGTGGCTTAA

Protein sequence :
MLGVASSCFYYTRVVCSDETTLHDRIYRIAEDSDFTYGKRRIHRELVKSDVKIGLAKVSRLMKAIEIPVKYPKKRHRYNE
VGEESIYAPNILKRQFTPETHNTHWVTDVTYIRSHQGWSYLACVLDLATKEVVGYSLSRSPDTNLTLAALDNAIQKRRAD
TTQLLLHSDQGCHFSSRAYRHRLQVLNITQSMSKRGCCWDNAVVERFFRSLKSERLNELSFINHQSIVMEVESYIRFYNY
KRSHSGIDYLTPNEKYQQMQKVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 7e-32 43
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 7e-32 43
tnpB CAB61574.1 transposase B Not tested HPI Protein 6e-38 42
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 3e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N175_13210 YP_008489008.1 integrase VFG1484 Protein 4e-32 43