|
Name : xerD (N175_12750) Accession : YP_008488936.1 Strain : Genome accession: NC_022223 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerD Function : - COG functional category : - COG ID : - EC number : - Position : 2721573 - 2722481 bp Length : 909 bp Strand : - Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : GTGTCTGAATATATTTCTCCTGATCAAGGGGTTGTGGAACAGTTTTTAGATGCGATGTGGATGGAGCGTGGTTTAGCTGA AAACACGCTCTCATCGTATCGCAATGATCTGACGAAATTGTTGCAATGGATGCAGCACAATAATTATCGCCTCGATTTTA TTAGTGTCACTGGTTTGCAGCAGTACCAAGCGTGGCTCGCTGATCAAGACTATAAGCAAACCTCGCGGGCGCGCATGTTG TCGGCGATTCGTCGTTTATTTCAATATCTGCACCGTGAGAAACTCCGCGGCGATGATCCGAGTGCGCTCTTAATTAGCCC TAAATTGCCACAGCGTCTGCCTAAAGATTTATCCGAGCAGCAAGTGGAAGATCTATTGAATGCTCCCGATACCAATAATC CTCTAGAATTACGTGACAGAGCGATGTTGGAACTCTTGTATGCAACAGGGCTACGGGTGACCGAATTGGTTTCACTGACC ATGGAAAATATCAGTTTACGTCAAGGCGTAGTAAGAGTGATTGGTAAAGGTGGCAAAGAGCGTCTTGTACCGATGGGCGA AAATGCCGTTGATTGGATTGAAACTTTTCTTGAACAAGGGCGGTCTACTCTGCTGGGCGAACAAACGTCGGATGTGGTTT TCCCTAGCCGACGCGCAAGGCAGATGACTCGTCAAACCTTTTGGCACCGAATTAAACACTACGCAGTGATCGCACAAATC GATGTGGAAAAACTCTCTCCACACGTATTAAGGCATGCTTTTGCCACGCATCTACTCAATTACGGTGCCGATTTGCGTGT AGTGCAAATGCTGCTCGGTCATAGTGACTTATCGACCACGCAAATTTATACTCATGTTGCGACTGAGCGACTTAAACAAT TACATAGCGAGCACCATCCAAGGGCTTGA Protein sequence : MSEYISPDQGVVEQFLDAMWMERGLAENTLSSYRNDLTKLLQWMQHNNYRLDFISVTGLQQYQAWLADQDYKQTSRARML SAIRRLFQYLHREKLRGDDPSALLISPKLPQRLPKDLSEQQVEDLLNAPDTNNPLELRDRAMLELLYATGLRVTELVSLT MENISLRQGVVRVIGKGGKERLVPMGENAVDWIETFLEQGRSTLLGEQTSDVVFPSRRARQMTRQTFWHRIKHYAVIAQI DVEKLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHSEHHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 1e-61 | 58 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 1e-61 | 58 |
