Gene Information

Name : N175_11910 (N175_11910)
Accession : YP_008488778.1
Strain :
Genome accession: NC_022223
Putative virulence/resistance : Virulence
Product : protein disaggregation chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2532010 - 2534601 bp
Length : 2592 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGAGGAAAGTTGGTATGCGTCTTGATCGATTTACAAGCAAATTTCAAATTGCCATTTCTGATGCTCAATCATTGGCATT
AGGCCGTGATCATCAATATATCGAGCCTGTTCATTTGATGGTGGCATTGCTCGATCAAAATGGCAGTCCAATTCGTCCAC
TTCTTACTATGTTAAGTGTGGACGTTATGCAATTGCGCTCGAAGCTCAGTGAGATATTAGACCGTTTGCCAAAAGTTAGC
GGTATCGGTGGTGATGTTCAGCTTTCTAGCGCAATGGGTACTATGTTCAATTTGTGCGATAAACTCGCGCAAAAACGGCA
AGATTCCTACATTTCTTCGGAAGTATTTTTGCTAGCCGCACTAGAAGATAAGGGCGCGCTTGGTCAATTACTCAAAGAAA
TAGGGCTTACCGAGAAAAAAGTTTCTGAAGCAATAGAAAAAGTGCGTGGAGGTCAGAAAGTGAATGATCCAAATGCAGAA
GAGCTAAGACAAGCGCTTGAGAAATTCACAATAGATCTAACTGAACGAGCGGAACAAGGCAAACTTGATCCTGTCATCGG
GCGTGATGATGAAATTCGTCGCACCATTCAAGTATTGCAACGCCGGACCAAAAACAACCCCGTGATTATTGGTGAGCCCG
GTGTAGGTAAAACGGCGATTGTGGAAGGGTTAGCGCAGCGCATTATTAATAATGAAGTACCAGAAGGTCTACGTGGCCGT
CGAGTATTGTCATTAGACATGGGGTCTTTGGTCGCAGGGGCTAAGTATCGTGGTGAATTTGAAGAACGCTTAAAATCGGT
GCTTAACGAGCTAGCGAAAGAAGAGGGTAATGTCATCCTCTTTATTGATGAGTTGCACACTATGGTCGGTGCAGGTCGAG
GCGAAGGCGCAATGGATGCGGGGAATATGCTTAAGCCAGCTCTGGCTCGAGGAGATCTACACTGCGTCGGTGCGACCACT
TTAGACGAGTATCGTCAATATATAGAGAAAGATCCGGCACTTGAGCGACGTTTCCAAAAGGTACTGGTTGATGAGCCTAG
CGTAGAAGACACAGTAGCTATTTTGCGTGGTTTGAAAGAGCGCTATGAGCTCCATCACCATGTGGAGATCACCGATCCCG
CTATTGTTGCTGCTGCGAGCTTATCGCACCGCTATATTTCTGATCGCCAGTTGCCCGATAAAGCGATTGATTTGATCGAT
GAAGCGGCTTCAAGCATTCGTATGCAAATAGATTCGAAACCAGAATCTTTGGATAAGCTTGAGCGTAAAATTATTCAGCT
GAAAATTGAACAACAAGCGCTAACGAATGAACACGATGAAGCGAGTGAAAAACGCTTACAGGTGTTAAATGAAGAGTTAA
AAGTGAAAGAGCGTGAGTTTGCCGAGCTGGAAGAAGTTTGGAATGCGGAAAAAGCAGCTCTTTCGGGCACTCAGCATATT
AAGTCCGAACTAGAACAAGCACGTATGGATATGGATTTCGCACGTAGAGCGGGTGACTTGAACCGTATGTCAGAACTTCA
ATACGGTCGAATTCCTGAGCTTGAAAAGCAGCTCGACCTTGCAACTCAAGCTGAAATGCAAGAGATGACTTTGCTGCGCA
ACAACGTAACTGATGTAGAAATTGCGGAAGTACTTTCAAAGCAAACTGGTATTCCAGTTTCTAAAATGCTGGAAGCTGAG
AAAGAAAAACTGCTGCAAATGGAGGATGCGCTGCATCAACGAGTTATCGGACAAGTTGAAGCCGTCGAAGTGGTATCAAA
TGCGATTCGCCGTAGCCGAGCTGGGTTATCTGATCCAAATAGACCGATTGGTTCCTTCTTATTCTTAGGGCCAACTGGTG
TGGGTAAAACTGAATTGTGTAAAACACTCGCAAACTTTATGTTTGATAGTGAAGATGCCATGGTGCGAATCGACATGTCT
GAGTTTATGGAAAAACACTCAGTAGCACGATTAGTCGGCGCGCCTCCAGGTTATGTGGGCTACGAAGAGGGTGGCTACTT
GACCGAGGCTATTCGTCGTAAACCGTACTCGGTTATCTTGTTGGATGAAGTTGAGAAAGCACACCCTGATGTCTTTAATA
TCCTGCTACAGGTATTAGATGATGGGCGCTTAACTGATGGACAAGGACGCACAGTTGATTTTCGTAATACAGTGGTAATT
ATGACCTCAAACTTAGGGTCTTCGCAAATTCAAGAAAAATTCGCAAGCTTGGATTATGAAGGCATTAAAAAAGAGGTAAT
GGAGATTGTAGGTAAGCATTTTAGACCAGAGTTCTTAAACCGAGTGGATGAAAGTGTAGTATTCCATCCGTTGGCGCAAG
AACAAATTAAATCGATCGCTTCTATTCAATTAGCCCGTCTTGGTAAACGAATGGAAGAGAAAGGTTATCAGCTTGAGGTA
TCTGAAAAAGCGTTAGAGCTGATTTCTCAAGTTGGGTTTGATCCTGTTTACGGAGCAAGGCCATTGAAACGCGCGATTCA
ACAAAGCGTTGAAAATCCATTAGCGAAAGAAATCTTGGCAGGAAGAATCCTACCGGATAAAAAAGTTAAGCTAGTTGTTA
GCAATGACCAAATTATTGCTCATCAAGACTAA

Protein sequence :
MRKVGMRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLSVDVMQLRSKLSEILDRLPKVS
GIGGDVQLSSAMGTMFNLCDKLAQKRQDSYISSEVFLLAALEDKGALGQLLKEIGLTEKKVSEAIEKVRGGQKVNDPNAE
ELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGR
RVLSLDMGSLVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDELHTMVGAGRGEGAMDAGNMLKPALARGDLHCVGATT
LDEYRQYIEKDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLID
EAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLQVLNEELKVKEREFAELEEVWNAEKAALSGTQHI
KSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNNVTDVEIAEVLSKQTGIPVSKMLEAE
KEKLLQMEDALHQRVIGQVEAVEVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMS
EFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI
MTSNLGSSQIQEKFASLDYEGIKKEVMEIVGKHFRPEFLNRVDESVVFHPLAQEQIKSIASIQLARLGKRMEEKGYQLEV
SEKALELISQVGFDPVYGARPLKRAIQQSVENPLAKEILAGRILPDKKVKLVVSNDQIIAHQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-163 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N175_11910 YP_008488778.1 protein disaggregation chaperone VFG0079 Protein 4e-139 42