Gene Information

Name : rdgC (N175_11850)
Accession : YP_008488774.1
Strain :
Genome accession: NC_022223
Putative virulence/resistance : Unknown
Product : recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2522149 - 2523063 bp
Length : 915 bp
Strand : +
Note : Required for efficient pilin antigenic variation; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTGGTTTAAAAACTGTATGGTTTATCGTGTTAATCGCGATGTAGAATTCAACGCCGATCAGCTCGAAAAACAACTGGC
CGAATTTCGTTTTACGCCATGCGGCAGCCAAGATAAGCAAAAATTTGGTTGGGTTAACGCAATGGGTAAACACGGCGACA
TGATGACCCACGTTTCTGAAGACCGTATTCTGATCTGCGCGAAAAAAGAAGAAAAGATGTTACCGGCTTCGGTCATTAAA
GATTCTTTGAATGCCAAAGTTGAAGCGATGGAAGTGGAAGAAGGGCGACCTCTCAAGAAAAAGGAGAAGGAAAGCCTCAA
GGAAGATATTGTCATCGATCTCCTACCTAGAGCATTTAGCCGCAGCAATCTCACTTTTGTGCTTATTCTACCCAAACAAG
GCTTCATTCTAGTCGATGCCGCAAGCTACAAAAAAGCTGAAGACGTTTTGGCGCTGCTACGCAAAACCATGGGTAGCCTA
CCCGTAGTACCTGCGATCCCAGAACAAGCGGTAGAAACAACACTTACTCAGTGGGTTAAAAGTGGCGAACTACCACAAGG
GTTTAGCTTGTTGGATGAAGCTGAATTAAAGTCGTTATTAGAAGATGGCGCAGTGATCCGCTGTAAGAAACAAGAACTGA
CAAGCGATGAGATCTTAAGCCATATTGAAGCCAATAAAGTTGTCACTAAACTGGCATTGAACTGGCAAGATCGCCTGAGC
TTTATTCTGGCTGAAGATTGTAGCATTAAGCGTTTGGCATTTAGCGATGAGCTCAAAGAACAAAATGAAGATATTCCACG
AGAAGAGCAAGCGGCTCGCTTTGATGCCGATTTTTCATTAATGTGTGGTGAAATGTCAACATTTTTGCCTAACTTATTTG
ACGTTCTCGGCGGCCTTCCTCACCCGAACGCTTAA

Protein sequence :
MWFKNCMVYRVNRDVEFNADQLEKQLAEFRFTPCGSQDKQKFGWVNAMGKHGDMMTHVSEDRILICAKKEEKMLPASVIK
DSLNAKVEAMEVEEGRPLKKKEKESLKEDIVIDLLPRAFSRSNLTFVLILPKQGFILVDAASYKKAEDVLALLRKTMGSL
PVVPAIPEQAVETTLTQWVKSGELPQGFSLLDEAELKSLLEDGAVIRCKKQELTSDEILSHIEANKVVTKLALNWQDRLS
FILAEDCSIKRLAFSDELKEQNEDIPREEQAARFDADFSLMCGEMSTFLPNLFDVLGGLPHPNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 3e-72 53