Gene Information

Name : N175_11380 (N175_11380)
Accession : YP_008488680.1
Strain :
Genome accession: NC_022223
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2422435 - 2423673 bp
Length : 1239 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGGAACCAGAGCAACTAGACTAACAAGTAAAGCTATTACCAACGCAAAGCCTAAAGAGAAGGATTATGTTCTTTCAGA
CGGCGACGGTTTACAGCTACGAGTTAGGACAAATGGTTCTCGGTTGTGGAACTTCAACTACCGCCACCCTATTACTAAAA
AACGCATCAACATGGGTTTAGGTGCTTTCCCTGAGTTATCTCTCGCTAATGCCCGTAAAAAGACAATAGAAGCAAGGGAG
CTTGTTGCTGATGGCATTGATCCTAAAGAAGCCAGAGATTCAAAGCTTTCTGAAATGCAAAAAGAGCTTGAAGACACATT
ACTCAACTTAGCTAAAGAGTGGTTTGAAAGAAAAAAAGAAAGTGTCACGCCAAACTATGCCGATGATATCTGGCGCTCGT
TAGAACTTCATGTATTCCCGCAAATAGCGAATACACCAGTAAAAGATATCGATGCCCCACTCGTTATTGATCTACTTAGA
CCTATCGAAGCAAAAGGCAGTTTAGAGACGGTTAAACGCTTATCTCAACGCTTAAACGAAATAATGAACTACGCGGCAAA
CTGTGGTCTTGTAAAAGCGAATCCATTAACGGGTATTCGAGCCCCTTTTAAAAACCCCAAAAAAAAAAAAATGGCAGCAC
TAGCACCAGATGAGCTACCAGAGCTCATGGGAGCGATCGCCAATGCCAGTATAAAGCGTACTACTCGTTGTTTAATTGAG
TGGCAACTTCACACCATGACACGACCTTCTGAAGCCGCAGGCGCTAGATGGGATGAGATTGAGTGGGAAGAAAAGATATG
GACCATTCCAGCCGAGAGAATGAAAAAAAGAAGAGAGCACCGCATCCCGCTCACAGAGCAGATGCTGGCGCTATTAGAAG
TAATAAAGCCGATAAGCGGCCACCGTGAATACATCTTTCCTTCAGATCGCGATCCGAAGAAGCCATGTAACAGCCAAACG
GCAAATATGGCTCTAAAACGTATGGGGTTTGCAGGAAGATTAGTTAGCCACGGTCTGCGCTCTCTCGCAAGTACTACACT
CAATGAACAAGGTTTTGACCGTGACTTGATCGAAGCGTCACTGGCACACGTTGATGATAACCAAGTGCGTAGCGCCTATA
ACCGGACTGACTACCTTGAACGTCGCCGGCCAATGATGAGCTGGTGGAGCGGGCATATTGAAACGGCCGCCAAAGGCAGT
CTATCTGTTACTGGGACCAAACAATTAAAAGTTATCTAA

Protein sequence : 
MGTRATRLTSKAITNAKPKEKDYVLSDGDGLQLRVRTNGSRLWNFNYRHPITKKRINMGLGAFPELSLANARKKTIEARE
LVADGIDPKEARDSKLSEMQKELEDTLLNLAKEWFERKKESVTPNYADDIWRSLELHVFPQIANTPVKDIDAPLVIDLLR
PIEAKGSLETVKRLSQRLNEIMNYAANCGLVKANPLTGIRAPFKNPKKKKMAALAPDELPELMGAIANASIKRTTRCLIE
WQLHTMTRPSEAAGARWDEIEWEEKIWTIPAERMKKRREHRIPLTEQMLALLEVIKPISGHREYIFPSDRDPKKPCNSQT
ANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDRDLIEASLAHVDDNQVRSAYNRTDYLERRRPMMSWWSGHIETAAKGS
LSVTGTKQLKVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAA82714.1 integrase Not tested VPI Protein 2e-153 73
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-153 73
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-153 73
int AAK20773.1 integrase Not tested VPI Protein 2e-153 73
int AAK20803.1 integrase Not tested VPI Protein 2e-153 73
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 5e-116 56
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 4e-107 54
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 4e-107 54
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 4e-107 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N175_11380 YP_008488680.1 integrase VFG1092 Protein 2e-107 54