Gene Information

Name : N175_09700 (N175_09700)
Accession : YP_008488354.1
Strain :
Genome accession: NC_022223
Putative virulence/resistance : Virulence
Product : accessory colonization factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2061887 - 2062684 bp
Length : 798 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAAGTTTCACCTGGTGATAACCACAATGACAATTAGCCTAACGAGCATGACAGTTTTGGCATCCCCTCAATTGGACCC
CAAAATCAAGCATCAGCCTAAAGATGGAATCATTAATATATATGGCCCAGGCGGCCCTGACTCTGCATTACGCCATGCTG
CAAATGCTTTTAGCCAGCAAAATGGCGTGGTAATAAACGTAATTGCAGGGCCGGAATCCAAATGGACGAAGCAAGCACAA
TCCAACGCTGACCTCTTTTTTGGTTCTTCTGAACAATCAATGAGCGCATTTGTGGAAACCTATCCTTTTATTACTGATAA
AGATGTTGATCCTGTTTATCTTCGCCGAGCCGTCATTGCTGTCGCGAAGGGAAACCCAAAACAGATCCAAGGGGTAAACG
ATTTACTTGATAAGCCTGCCCGTATTGTCGTAACGGAAGGACTGGGTGTGTATAACACATCAGGTTCTGGAGTATGGGAA
GATATCGCAGGGCGTACTGGTTCATTGCAAGATGTTCAGAACTTCCGAAGTAAGATCATTGCTTATGCAAAAGGCAGTGG
TGCAAGTTTCAAAGCATTTCAAGAACGAAATGCCGATGCGTGGATTACTTGGATTCACTGGCCTTTGAATCATGCCGATC
AAGTAGATTATGTCGAGATTGAGCCTGAACGCCGTATTTATCGCGATTTAACTGTCGCAAAGACAGAAAACGCCGATCCA
CAAACACAGGCGTTCATTGATTTTATACGTAGCAAAGAAGGCAAACCCTTTTTTGAGCGTGAAGGTTGGACAAACTAA

Protein sequence : 
MKFHLVITTMTISLTSMTVLASPQLDPKIKHQPKDGIINIYGPGGPDSALRHAANAFSQQNGVVINVIAGPESKWTKQAQ
SNADLFFGSSEQSMSAFVETYPFITDKDVDPVYLRRAVIAVAKGNPKQIQGVNDLLDKPARIVVTEGLGVYNTSGSGVWE
DIAGRTGSLQDVQNFRSKIIAYAKGSGASFKAFQERNADAWITWIHWPLNHADQVDYVEIEPERRIYRDLTVAKTENADP
QTQAFIDFIRSKEGKPFFEREGWTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 6e-40 42
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 6e-40 42
acfC AAA82706.1 AcfC Virulence VPI Protein 6e-40 42
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 1e-39 42
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 1e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N175_09700 YP_008488354.1 accessory colonization factor VFG0839 Protein 4e-44 43
N175_09700 YP_008488354.1 accessory colonization factor VFG0105 Protein 5e-40 42