Gene Information

Name : sirA (N175_06980)
Accession : YP_008487822.1
Strain :
Genome accession: NC_022223
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1441407 - 1442120 bp
Length : 714 bp
Strand : +
Note : in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate v

DNA sequence : 
GTGGGCCGCGATGCTGCTATCCACGATTCAGTGGGTGCAGAGCCAATAGATGAGTGTGGAGATACAAGTTTGATAAGTGT
TTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAATGAACGTAGTAG
GGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGTCGCAGTAATCATGTCGACGTTGTTTTAATGGATATGAACATG
CCTGGTATCGGCGGTTTGGAAGCGACAAAAAAAATTCTGCGCTTTAATCCAGATGTGAAAATCATCGTGTTAACGGTTCA
TACGGAAAATCCATTTCCGACCAAAGTGATGCAAGCTGGAGCCGCGGGTTATTTAACCAAAGGTGCAGGCCCAGATGAAA
TGGTCAACGCGATTCGCATTGTGAATAGCGGGCAGCGTTATATCTCGCCTGAAATCGCACAGCAAATGGCATTAAGCCAA
TTCTCGCCAGCTTCTGACAATCCATTTGCTGATCTCTCGGAAAGAGAGCTGCAGATTATGATGATGATTACCAAAGGGCA
AAAAGTGACGGATATTTCCGAGCAACTTAGTCTTAGCCCCAAAACAGTAAATAGCTATCGCTATCGACTGTTTAGTAAGT
TAGCGATCAGCGGTGATGTTGAACTGACCCATTTAGCTATTCGACACGGAATGTTAGACACCGAGACGCTTTAG

Protein sequence : 
MGRDAAIHDSVGAEPIDECGDTSLISVFLVDDHELVRTGIRRIIEDVRGMNVVGEADSGEEAVKWCRSNHVDVVLMDMNM
PGIGGLEATKKILRFNPDVKIIVLTVHTENPFPTKVMQAGAAGYLTKGAGPDEMVNAIRIVNSGQRYISPEIAQQMALSQ
FSPASDNPFADLSERELQIMMMITKGQKVTDISEQLSLSPKTVNSYRYRLFSKLAISGDVELTHLAIRHGMLDTETL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-50 51
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-50 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sirA YP_008487822.1 response regulator VFG1889 Protein 4e-55 52