Gene Information

Name : N175_06555 (N175_06555)
Accession : YP_008487741.1
Strain :
Genome accession: NC_022223
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.38
Position : 1351402 - 1352154 bp
Length : 753 bp
Strand : +
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; Derived by automated computational analysis using gene prediction method:

DNA sequence : 
ATGGCTTTCACCGTTGTTATCCCTGCTCGTTATCAGTCAACTCGCTTACCTGGCAAACCTTTGGCTGATATCGGCGGTAA
ACCCATGATTCAGTGGGTTTATGAGCAAGCGTTACAATCGGGAGCTGAGCAGGTCGTTATTGCTACTGATGATGCTCGTG
TTGAAGCGGCTGTCCATGCGTTTGGTGGCAATGTTTGTATGACATCATCACATCACGAGTCCGGTACTGAGCGTTTAGCC
GAAGTGGTGAAATTAATGGGCATTGCCGATCACCACATTATTGTTAACGTACAAGGTGATGAGCCACTCATTCCACCGAG
CATCATCAAGCAGGTCGCTAACAATTTAGCCAACAGTAGCGCGCCGATGGCGACTTTAGCGGTTGAAATTACTGATCAAG
CTGAAGTGTTTAACCCTAACGCGGTTAAAGTGGTAACAGATCAAGAGGGTTACGCGCTGTATTTCAGCCGTGCGACAATT
CCTTGGGATAGAGACAATTTTGCAACTGGTGGTCAAACGGTGATTCAGCCATTGCTACGTCATATTGGTATTTACGCTTA
TCGGGCTGGTTTCATCAATACTTATATCAACTGGCAACCCAGTGTACTTGAGAAAATTGAGTGTTTAGAGCAGCTTCGAG
TACTGTGGTATGGTGAAAAAATTCACGTTGCCGTTGCTAAAGAAGCACCACCTGCAGGGGTAGATACACCAGAAGATTTA
GAGTTAGTGAGAGCGATAGTAAGCCAACGTTAG

Protein sequence : 
MAFTVVIPARYQSTRLPGKPLADIGGKPMIQWVYEQALQSGAEQVVIATDDARVEAAVHAFGGNVCMTSSHHESGTERLA
EVVKLMGIADHHIIVNVQGDEPLIPPSIIKQVANNLANSSAPMATLAVEITDQAEVFNPNAVKVVTDQEGYALYFSRATI
PWDRDNFATGGQTVIQPLLRHIGIYAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPPAGVDTPEDL
ELVRAIVSQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 4e-41 48
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 3e-41 48
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-41 48