Gene Information

Name : N175_06160 (N175_06160)
Accession : YP_008487662.1
Strain :
Genome accession: NC_022223
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1258385 - 1259086 bp
Length : 702 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAGAATTCTTTTAATTGAAGATGATGCCAGAATTGCCAACTTTATTGAGCGAGGGCTCAAAGCAGAAGGTCACCACAT
TCAGCGACTAAATGATGGGCAATACGCACTTGAAACACTCATAAGCGGCGAGCCCGATATTTTAATTTTAGATCGAATGC
TTCCGCACACCGATGGATTAACTCTTTGTCAGCAAATACGTGAAGCCGGTATTGATGTGCGCATTTTGATGCTTTCTGCA
CTGGGCGAAGTTGAAGAACGGGTTCGGGGCCTACGCATTGGTGCGGATGATTATCTGGCAAAACCTTTTCATTTTGAAGA
GTTACTGGCTCGCCTAGATGCGCTGCAACGTCGACATTCTGACTCTGCGCCAATGCCCACTCTACACATTGCAGACTTAA
CGCTCTGCTTATCAACCATGGCCGTAACACGGGCAGGGCAAGCCATTGAGTTAACCGCCAAAGAACTCTCCATATTAGAG
CTATTGATGCATAAACCCGGTCATATTTTTAGCCGAGAACGGATTCTTGCTAATGTTTGGGGTCTCCATCAAGATCCCCT
AACCAACGTAGTCGATGTGTATATGCGTCGTCTACGCAAAAAAATTGATGACCCTTTCTCATCAGCACTGATTAAAACTA
AACGCGGTATGGGCTATTTTCTCGATAAAAATAGTGGTGAGCAACGCACAGGAAATGGATAA

Protein sequence : 
MRILLIEDDARIANFIERGLKAEGHHIQRLNDGQYALETLISGEPDILILDRMLPHTDGLTLCQQIREAGIDVRILMLSA
LGEVEERVRGLRIGADDYLAKPFHFEELLARLDALQRRHSDSAPMPTLHIADLTLCLSTMAVTRAGQAIELTAKELSILE
LLMHKPGHIFSRERILANVWGLHQDPLTNVVDVYMRRLRKKIDDPFSSALIKTKRGMGYFLDKNSGEQRTGNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N175_06160 YP_008487662.1 transcriptional regulator BAC0125 Protein 1e-41 46
N175_06160 YP_008487662.1 transcriptional regulator BAC0638 Protein 3e-39 46
N175_06160 YP_008487662.1 transcriptional regulator BAC0308 Protein 1e-39 44
N175_06160 YP_008487662.1 transcriptional regulator BAC0083 Protein 5e-42 43
N175_06160 YP_008487662.1 transcriptional regulator BAC0197 Protein 2e-39 42
N175_06160 YP_008487662.1 transcriptional regulator HE999704.1.gene1528. Protein 2e-29 42
N175_06160 YP_008487662.1 transcriptional regulator AE015929.1.gene1106. Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N175_06160 YP_008487662.1 transcriptional regulator VFG1390 Protein 2e-38 44
N175_06160 YP_008487662.1 transcriptional regulator VFG0596 Protein 3e-34 41