Gene Information

Name : N175_05385 (N175_05385)
Accession : YP_008487510.1
Strain :
Genome accession: NC_022223
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1097554 - 1098393 bp
Length : 840 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTTGCTGGTGGCATTATTGTTTACCCCGTTTGCGTTTTCAGAGCAAGAGTTAGCCACGCCAATTCCTTCCAGCACCGT
AGGTGCAGAAACGGTGACAGTAACGGCGATGAATAAAGACAGTGGCGCCTCTAAAACGATAGCCGCTGGTAGCGTCAGTG
GTGGTGGCGGTATTCCAGCATTTACCATGACGACCAATTCAGATGGCAGTCAAGATTACTCGATCAATCTACAAATTTTA
GCCTTGATGACCATGTTGGGTTTTTTGCCTGCCATGGTCATTTTGATGACTTCCTTTACACGTATCGTGATTGTGATGTC
GATCTTGCGCCAGGCAATGGGCCTGCAACAAACGCCGTCAAACCAAGTAATTATCGGCATCGCTATTTTTCTCACTTTTT
TCATTATGTCACCAGTCATCAATGCCATTAATGAGCAAGCTGTGCAGCCGTATCTCAATGAGCAGATGACGGCGCGTCAA
GCGTTTGATACGGCTCAAGAGCCACTAAAAGCCTTCATGCTGAAACAGACGCGAGTCAAAGATTTAGAAACCTTTGTTGA
GATATCGGGCTCTGACGCAACCAATCCTGAAGAGGTCTCGATGGCGGTGCTGATCCCTGCGTTCATCACCTCGGAGCTAA
AAACGGCGTTTCAAATCGGCTTTATGCTATTTTTACCCTTTTTAATCATTGATTTAGTGGTGGCGTCTGTTTTGATGGCG
ATGGGTATGATGATGCTTTCGCCGATGATCGTCTCGCTGCCTTTTAAACTCATGCTGTTTGTACTAGTGGATGGATGGAA
CTTGATCCTCTCAACGCTAGCCGGCAGTTTTGCTTTATAG

Protein sequence :
MLLVALLFTPFAFSEQELATPIPSSTVGAETVTVTAMNKDSGASKTIAAGSVSGGGGIPAFTMTTNSDGSQDYSINLQIL
ALMTMLGFLPAMVILMTSFTRIVIVMSILRQAMGLQQTPSNQVIIGIAIFLTFFIMSPVINAINEQAVQPYLNEQMTARQ
AFDTAQEPLKAFMLKQTRVKDLETFVEISGSDATNPEEVSMAVLIPAFITSELKTAFQIGFMLFLPFLIIDLVVASVLMA
MGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSFAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 6e-27 43
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 7e-26 41
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 7e-27 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 6e-27 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 6e-27 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 4e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N175_05385 YP_008487510.1 flagellar biosynthesis protein FliP VFG1259 Protein 3e-62 68
N175_05385 YP_008487510.1 flagellar biosynthesis protein FliP VFG2016 Protein 8e-60 66
N175_05385 YP_008487510.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-52 57
N175_05385 YP_008487510.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-47 54