Name : kdpD (RSAU_001918) Accession : YP_008485877.1 Strain : Staphylococcus aureus 6850 Genome accession: NC_022222 Putative virulence/resistance : Unknown Product : Osmosensitive K channel sensor histidine kinase KdpD, putative Function : - COG functional category : - COG ID : - EC number : - Position : 2049170 - 2051827 bp Length : 2658 bp Strand : + Note : - DNA sequence : ATGTCAAACACTGAATCGCTAAACATAGGAAAAAAGCGTGGATCTTTAACAATTTACATCGGTTACAGTCCAGGTGTTGG TAAAACATTTGAGATGCTTTCAAATGCCATTGAACTATTTCAAAGTAACGTTGATATTAAAATAGGATATATTGAACCGC ATCAACGTGATGAAACAAATGCATTAGCTGAACAATTACCTAAAATCGCAACCAATTTTACTAAACATGGTAGTCATCAT TTTCAATATTTAGATGTCGACCGCATAATCGAAGAATCGCCGACAATAGTACTTATCGATGAGTTAGCACATACGAACAT TTCTAGAGATCGTCATGAGAAACGATATATGGATATTGAAGAAATTTTAAATCATGGTATCGATGTTCATACTACTTTGA ACATTCAACATATTGAAAGTTTAAGTAGTCAAATTGAACTGATGACCGGTGTACATGTTAAAGAACGTGTACCCGACTAT TTCATAATGAGCGCCGATGTATTAGAAGTCGTAGATATCTCACCTGAACAATTAATTAAACGCTTAAAAGCTGGTAAGGT ATATAAAAAGGATAGGCTAGATGTAGCATTTAGTAATTTCTTTACGTATGCCCACCTAAGCGAACTGCGTACATTGACGT TAAGAACAGTTGCCGACTTGATGAGTGATAAAGAAAAAGTCCGACACAACCATAAAACGTCACTCAAACCTCATATTGCT GTGGCAATTAGTGGGAGCATTTATAATGAAGCAGTAATTAAAGAGGCATTCCATATTGCTCAAAAAGAACATGCAAAATT CACTGCTATTTATATAGATGTATTCGAAAAAAACAGGCAATATAAAGATAGTCAAAAGCAAGTGCATCAACATCTCATGC TTGCAAAATCATTAGGAGCAAAAGTAAAAGTAGTTTATAGCCAAACCGTTGCATTAGGATTAGACGAATGGTGTAAAAAT CAAGATGTAACCAAATTAATTATCGGACAACATATTAGAAATAAGTGGCGAGACTTTTTCAATAAACCTTTAATTGACCA TTTAATGTCCTTTGAACATAGCTATAAAATTGAAATCGTTCCAATCAAACAAATACCTGTTGAATTGAAAATGAACAAGT CACCCTATCGTCCTAAAGGCAAACGTTTCGCCATAGATATGTTAAAAATGATTTTGATTCAAATAATTTGTGTAATGATG GGACTATGGATTTATCAACTTGATAAGTATGAGTCTAGTACGATTATTTTAATGATTTTTCTCATCGGCATCATTTTATT ATCCATTTGGACGCGGTCCTACATCATTGGCTTTTTAGCAGCAATTATTAACGTATTTGTTTTTAATTATTTTTTTACGG AACCTAGATATACATTTGAAGTATACCGCTTTGACTATCCTATTACATTTATCGTTAGCATTTTAACAAGTATTTTAACA AGTGCTTTATTAAAACAAATTAAATTCCAATACTCCATTACTAAAAAGCAACTCTATCGTACAGATTTATTATTTCAATT TAATGATTCGATTAAACAAACTTATACAGTTGAAAACTTACTAATAAATGCTGGATACCAAATTAATCAATTATTGCAAC AATCAATTACTATATACGTTATCAATCAATCCAAAGTAATTAAAACAATACCATTGCAAAACCATATCGATAATACGACT CAACAGCATGAACAAGCATTAAGCTGGGTAATTAAAAATGAAAGACAAGCTGGTGCAACAACAGATACATTTCCAGGCAT TAATAAATGGTTGATACCAATTGGCACATCTCCGATTAAAGGCATTCTAGCCATTGATAACCAAAGTTCTCAAGTGATTA ATCCATATGATGCATCAATATTAGAATCAATGTTAAATGAACTTTCTCTCGCTGTTGAAAATGTGACGTTACTTAAACAA ACGAGAGAATCCATGTTACAGGCTGAACGCCAACTGACACATTCAAATTTTTTAAGATCAATTTCGCATGACATACGTAC ACCGTTAACAACAATTATGGGAAATTTAGATATTTTAGTATCACATAGTAAAGATATGTCTATCATAGAAAAGGAACAAT TACTTGTGCATAGTTTTCAAGAAAGTCAGTATTTATATCTATTAGTGACAAATATTTTATCATTAACAAAATTACAATCA TCAAATGTTCAGATAAAATTGCAACCTTATCTCGTTAGTGAATTAGTAGAAGAAATCGATATGATTTTAGAACGTCGCCA TTTAAAAAAGCGTATAACTGTATCATCCTCAGTAGATTTACAGTTTATACACATTGACAGTAAGTTGATTTTACAAGCTT TATTCAATTTGATTGAAAATGCAGTTAAACACACTTCTACTGACACCAAAATCAATTTATCTATTCGTTATGCTAGCGAT GAACAAATCGAATTTGCCGTTATAGACGAAGGACCTGGAATTAGTTTAGAAGAACAACAAAAGATATTCGAGCCTTTTTA CACAGGATCAAATAAATATTTTAAAGATAACCAAAAAGAAAGCATGGGACTAGGCTTATATTTAGTACAGACTATCCTAC ACAAACATCAATCAAACTTACAATATAAACCGAACCAACCACACGGCAGTATATTCTATTTCAATATAGATACAGACTTT AATGAAGGAGACATATAA Protein sequence : MSNTESLNIGKKRGSLTIYIGYSPGVGKTFEMLSNAIELFQSNVDIKIGYIEPHQRDETNALAEQLPKIATNFTKHGSHH FQYLDVDRIIEESPTIVLIDELAHTNISRDRHEKRYMDIEEILNHGIDVHTTLNIQHIESLSSQIELMTGVHVKERVPDY FIMSADVLEVVDISPEQLIKRLKAGKVYKKDRLDVAFSNFFTYAHLSELRTLTLRTVADLMSDKEKVRHNHKTSLKPHIA VAISGSIYNEAVIKEAFHIAQKEHAKFTAIYIDVFEKNRQYKDSQKQVHQHLMLAKSLGAKVKVVYSQTVALGLDEWCKN QDVTKLIIGQHIRNKWRDFFNKPLIDHLMSFEHSYKIEIVPIKQIPVELKMNKSPYRPKGKRFAIDMLKMILIQIICVMM GLWIYQLDKYESSTIILMIFLIGIILLSIWTRSYIIGFLAAIINVFVFNYFFTEPRYTFEVYRFDYPITFIVSILTSILT SALLKQIKFQYSITKKQLYRTDLLFQFNDSIKQTYTVENLLINAGYQINQLLQQSITIYVINQSKVIKTIPLQNHIDNTT QQHEQALSWVIKNERQAGATTDTFPGINKWLIPIGTSPIKGILAIDNQSSQVINPYDASILESMLNELSLAVENVTLLKQ TRESMLQAERQLTHSNFLRSISHDIRTPLTTIMGNLDILVSHSKDMSIIEKEQLLVHSFQESQYLYLLVTNILSLTKLQS SNVQIKLQPYLVSELVEEIDMILERRHLKKRITVSSSVDLQFIHIDSKLILQALFNLIENAVKHTSTDTKINLSIRYASD EQIEFAVIDEGPGISLEEQQKIFEPFYTGSNKYFKDNQKESMGLGLYLVQTILHKHQSNLQYKPNQPHGSIFYFNIDTDF NEGDI |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
kdpD | NP_370595.1 | sensor protein KdpD | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |
kdpD | NP_373307.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |
SH0032 | YP_251947.1 | hypothetical protein | Not tested | SCCmec | Protein | 0.0 | 59 |
kdpD | YP_190032.1 | sensor histidine kinase KdpD | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |
SAR0069 | YP_039537.1 | sensor kinase | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |