Gene Information

Name : SPUCDC_3900 (SPUCDC_3900)
Accession : YP_008483439.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3952502 - 3952693 bp
Length : 192 bp
Strand : +
Note : -

DNA sequence :
ATGTCCCGCAAAGGCAACTGCCTTGATAATGCCTGTGCAGAATGTTTTTTCGGGACTTTAAAATCAGAAAGTTTTTACAC
CAGTAAATTTAAGGATATTGATGAACTTAAGATAGCTATTGAGGATTACATACGATACTACAATACCCGACGAATTAGCC
TTAAATTTAACGGACTCAGCCCGGTTGAATAG

Protein sequence :
MSRKGNCLDNACAECFFGTLKSESFYTSKFKDIDELKIAIEDYIRYYNTRRISLKFNGLSPVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0166 YP_281530.1 transposase Not tested Not named Protein 4e-04 44
unnamed CAD42036.1 hypothetical protein Not tested PAI II 536 Protein 5e-05 44
CD241_0076 YP_005124345.1 transposase-like protein Not tested Not named Protein 8e-06 43
EXB3 ABD94690.1 transposase derived protein Not tested ExoU island B Protein 2e-04 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPUCDC_3900 YP_008483439.1 transposase VFG1555 Protein 2e-05 44