Gene Information

Name : SPUCDC_3793 (SPUCDC_3793)
Accession : YP_008483336.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3838447 - 3839064 bp
Length : 618 bp
Strand : -
Note : -

DNA sequence : 
ATGATGAGAAAGCCTTCACAAATTGTCCATTGCATTAGTTGCGATTTATCCTGTCAATTATTTCCTGACAGCGCAGTACG
GGTGCAATACTGTCATAATGCGGCATTTTCCATCTGGCCAGATGGTAATGCTTTCCTGAAAAAAGGGTTTATTGAAAAGT
TATTGCTTGATAGACACAACCATTTATCCAGCGGTTTTATCTTTGTTGATTTTTCTTTCCCGAATCTTCGACGATTTACC
GATTTGCAATGGGCTGACAGTCTGGCAGACAGTGGCATGCATATTGTCCTGATTTCTGACAGAAGTTTAACTCCGCTGGC
CAATTACTGGATTTTGAAAAGCAATAAAATACAAGGAATTATTTATTCCGATGACGATGATATTGTGCAACAGCAAAAGA
TGCACCGCTTGTTTACCGGTCGGCTTGCCAACAGTAAACGTGGACGAACGCTTAACTATACGGAATTTATATTACTGAAG
CGCTTTGTATCAGGAATAAGTATTCAGCAGATTGTAAATATTGACAATATTGATATTAAGAAACTTTATGTGCATAAGCT
GCGGCTTGAAAATAAGCTAGGGCATAGCATTCATAAAATAATATCAAATATTTTATAG

Protein sequence : 
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFT
DLQWADSLADSGMHIVLISDRSLTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLK
RFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rmbA NP_462655.1 hypothetical protein Not tested SPI-3 Protein 5e-87 100
rmbA AAD16953.1 RmbA Not tested SPI-3 Protein 4e-87 100
rmbA YP_218664.1 hypothetical protein Not tested SPI-3 Protein 1e-86 99
unnamed AAO49826.1 RmbA Not tested SPI-3 Protein 4e-86 99
rmbA NP_458174.1 conserved hypothetical protein Not tested SPI-3 Protein 2e-86 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPUCDC_3793 YP_008483336.1 hypothetical protein VFG0567 Protein 2e-87 100