Gene Information

Name : hilC (SPUCDC_2850)
Accession : YP_008482430.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : putative AraC-family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2866643 - 2867530 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :
ATGGTATTGCCTTCAATGAATAAATCAGTTGAGGCCATTAGCAATAATCACCTTCAACAGCCGAACAAATTTCCATTAAT
AAATGGATTAGCTGACGTAAGAGACTATTATGTCGCAAACTGCTTATTGTTTAAACTTAATAAAGGCAGTTTGCGAATTG
AAAACGAATTTGGGGAGTTCATCGAACAATCTGCGCCGTGTTTATTTTTATTGGAAAAAGATCAAACAATCACGCTTAGT
ATGAGCGAAATAGAAGGGCATATTGATTTTTCTTCACTGGAAGTTTCCTATGACTTAATGCAAAAATTCTACAAAGTTTT
TTACAGTACAAGAAACTATAATGATCGAGAGCTATCATTAAAAACGAAACCAAAGTATTTTTTTCATGCGGACTTGTTGC
CAGGGATGAGTGATACTTTTGACTCTATTTTGCATGGTGTGGCATGTCCACGGGTTTGTAGTAATGTGAGTATTGATGAT
CATGATTATTCATATTTCTCATTGATGTATCTTATATCGGCATTTGTACGTAAGCCCGGTGGGTTTGATTTCCTTGAGCG
AGCAATAAAAATTACGACAAAAGAGAAAGTTTATAACATTATTATCAGCGATCTCACCCGCAAATGGTCACAGGCTGAGG
TGGCGGGAAAGCTGTTTATGAGCGTATCAAGTCTGAAGCGAAAACTGGCCGCTGAAGAGGTGAGTTTTAGCAAAATATAC
CTAGATGCTCGTATGAATCAGGCTATAAAATTATTACGTATGGGGGCTGGAAATATTTCACAAGTCGCGACGATGTGTGG
CTATGATACGCCTTCTTATTTTATCGCTATTTTTAAACGGCATTTTAAGATTACACCGCTTAGCTTTATGCGTACGATGA
ACCATTGA

Protein sequence :
MVLPSMNKSVEAISNNHLQQPNKFPLINGLADVRDYYVANCLLFKLNKGSLRIENEFGEFIEQSAPCLFLLEKDQTITLS
MSEIEGHIDFSSLEVSYDLMQKFYKVFYSTRNYNDRELSLKTKPKYFFHADLLPGMSDTFDSILHGVACPRVCSNVSIDD
HDYSYFSLMYLISAFVRKPGGFDFLERAIKITTKEKVYNIIISDLTRKWSQAEVAGKLFMSVSSLKRKLAAEEVSFSKIY
LDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSFMRTMNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hilC YP_217786.1 AraC family transcriptional regulator Not tested SPI-1 Protein 5e-138 100
sprA NP_457261.1 possible AraC-family transcriptional regulator Virulence SPI-1 Protein 7e-137 99
sprA NP_806470.1 AraC family transcriptional regulator Virulence SPI-1 Protein 7e-137 99
hilC NP_461788.1 invasion regulatory protein Virulence SPI-1 Protein 1e-137 99
sprA AAD37784.1 transcriptional regulator SprA Virulence SPI-1 Protein 1e-137 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hilC YP_008482430.1 putative AraC-family transcriptional regulator VFG0531 Protein 6e-138 99