Gene Information

Name : SPUCDC_2702 (SPUCDC_2702)
Accession : YP_008482294.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2707687 - 2707881 bp
Length : 195 bp
Strand : +
Note : -

DNA sequence :
ATGCCATTAACCACTGAAGAAGGGCTGCAGATCCTGATCTGCTGGCTGCAGGACAATATCGACTGTGGTACAGAGATCAT
CTTCGATAACGACGATACTCTCACCGGTTCAGCAGCACTCCTGCCCTCTGTTGAACAGGCCCTGAACGAGGTCCGGATGA
TACACTACCTCCGGCTTTTACTTTCTCCGCAGTAA

Protein sequence :
MPLTTEEGLQILICWLQDNIDCGTEIIFDNDDTLTGSAALLPSVEQALNEVRMIHYLRLLLSPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1225 NP_286759.1 hypothetical protein Not tested TAI Protein 1e-12 64
unnamed AAL08480.1 unknown Not tested SRL Protein 7e-13 64
Z1663 NP_287165.1 hypothetical protein Not tested TAI Protein 9e-13 64
ECO111_3780 YP_003236115.1 hypothetical protein Not tested LEE Protein 4e-12 62
unnamed CAD42103.1 hypothetical protein Not tested PAI II 536 Protein 6e-12 62
unnamed AAK00484.1 unknown Not tested SHI-1 Protein 5e-11 61
SF3001 NP_708775.1 hypothetical protein Not tested SHI-1 Protein 7e-11 61
unnamed AAC31488.1 L0009 Not tested LEE Protein 5e-09 61
Z5093 NP_290244.1 hypothetical protein Not tested LEE Protein 8e-09 61
unnamed ACU09435.1 conserved hypothetical protein Not tested LEE Protein 5e-09 61
ECs4541 NP_312568.1 hypothetical protein Not tested LEE Protein 8e-09 61
c5147 NP_756995.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-12 60
unnamed AAL67387.1 L0009-like protein Not tested PAI II CFT073 Protein 5e-12 60
ECO103_3594 YP_003223451.1 hypothetical protein Not tested LEE Protein 3e-11 60
unnamed CAD66209.1 hypothetical protein Not tested PAI III 536 Protein 8e-12 60
unnamed CAE85206.1 hypothetical protein Not tested PAI V 536 Protein 8e-12 60
z1225 CAD33791.1 Z1225 protein Not tested PAI I 536 Protein 3e-11 59
unnamed CAI43850.1 hypothetical protein Not tested LEE Protein 3e-11 58
unnamed ADD91697.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 3e-11 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPUCDC_2702 YP_008482294.1 hypothetical protein VFG1071 Protein 3e-13 64
SPUCDC_2702 YP_008482294.1 hypothetical protein VFG1622 Protein 2e-12 62
SPUCDC_2702 YP_008482294.1 hypothetical protein VFG0665 Protein 2e-11 61
SPUCDC_2702 YP_008482294.1 hypothetical protein VFG0788 Protein 2e-09 61
SPUCDC_2702 YP_008482294.1 hypothetical protein VFG1684 Protein 3e-12 60
SPUCDC_2702 YP_008482294.1 hypothetical protein VFG1532 Protein 1e-11 59