Gene Information

Name : safB (SPUCDC_2661)
Accession : YP_008482257.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : salmonella atypical fimbria chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2673378 - 2674118 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATTATTAGTTTTGGTGTAATGGCGGCTTGTTTATTCGTCTCTAATTCTATAACTCCTCCAGTGTATGCCTCTGA
GCAGAAATTAAATTTAAACACTAAATCATTCAGCGTGAAGCTGGGGGCTACACGGGTGATTTATCACGCTGGTACAGCTG
GAGCCACGCTCTCGGTGAGCAACCCGCAGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGCAGACAAAAGTTCG
CCTGCTCCCTTTTTGGTGATGCCGCCTCTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTGTCCGTACTGG
TGGTGACATGCCAACGGATCGTGAGACTTTACAGTGGGTCTGTGTAAAGGCGGTACCACCCGAAAATGAACCGTCGGATA
CACAGGCTAAGGGCGCGACCCTTGACCTCAATTTGTCCATTAACGTCTGTGATAAGCTGATTTTCCGCCCGGATGCCGTG
AAGGGGACGCCGGAAGATGTTGCAGGAAATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTGGAGAACCCCACCCC
GTTTTACATGAATTTAGCCTCCGTCACAGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATATCCCCCCTTTTGCTGACA
AAACACTAAATATGCCAGGTAGTGCCCATGGTGATATCGAGTGGAGAGTTATTACAGACTTTGGTGGTGAAAGTCATCCG
TTCCACTACGTCCTTAAATAA

Protein sequence : 
MKIISFGVMAACLFVSNSITPPVYASEQKLNLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSS
PAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCVKAVPPENEPSDTQAKGATLDLNLSINVCDKLIFRPDAV
KGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGSAHGDIEWRVITDFGGESHP
FHYVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 2e-112 98
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 3e-54 46
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 3e-54 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
safB YP_008482257.1 salmonella atypical fimbria chaperone VFG0943 Protein 7e-52 52
safB YP_008482257.1 salmonella atypical fimbria chaperone VFG0850 Protein 3e-55 50
safB YP_008482257.1 salmonella atypical fimbria chaperone VFG0852 Protein 3e-53 49
safB YP_008482257.1 salmonella atypical fimbria chaperone VFG0858 Protein 3e-53 47