Gene Information

Name : ribD (SPUCDC_2537)
Accession : YP_008482142.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2546274 - 2547377 bp
Length : 1104 bp
Strand : -
Note : -

DNA sequence :
ATGCAGGATGAGTTTTACATGGCGCGAGCGCTCAAACTGGCGCAGCGTGGACGTTTCACCACTCACCCGAACCCTAATGT
CGGCTGTGTCATTGTTAACAATGGCGACATCGTCGGCGAAGGTTATCACCAGCGCGCCGGAGAGCCGCACGCCGAGGTCC
ATGCGCTGCGGATGGCGGGCGCAAAAGCCAAAGGCGCAACCGCCTATGTCACGCTTGAACCCTGTAGCCATCATGGGCGA
ACGCCGCCATGTTGCGATGCGCTGATTGCGGCTGGCGTCGCGCGCGTGGTCGCCGCGATGCAGGACCCGAACCCACAGGT
CGCCGGGCGCGGACTGTATCGCCTGCAACAGGCGGGTATTGCGGTCAGCCACGGGTTAATGATGAGTGAAGCGGAGGCGC
TCAATAAAGGCTTCCTCAAACGGATGCGTACCGGATTCCCTTATCTTCAGCTTAAACTGGGCGCCTCCGTCGACGGACGG
ACGGCGATGGCCAGCGGCGAAAGCCAGTGGATCACCTCGCCGCAGGCCCGGCGCGACGTTCAGCGCTTGCGTGCGCAAAG
TCACGCTATCTTAACCAGTAGCGCGACGGTATTGGCTGACGATCCGGCCTTGACGGTGCGTTGGGCGGAGTTAGACGCCT
CTACGCAGGCGTCTTACCCGCAGGAAAATCTGCGCCAGCCGGTGCGAATTGTTATCGACAGCCAAAACCGGGTAACGCCT
GCGCATCGTATTGTGCAGCAGCCTGGCGAAACGTGGATTGCGCGTACCCAGGAAGATAGCCGCGCGTGGCCCGATTCGGT
TCGTACTATCAGCGTGCCGGCGCACAACGGACATTTGGATCTGGTTGTGCTGATGATGCAGTTAGGCAGGCAGCAGATTA
ATAGCATATGGGTTGAAGCCGGACCGGGACTGGCGGGCGCGTTGCTGCAAGCCGGGCTGGTGGATGAACTGATTGTCTAT
GTCGCGCCTAAATTGTTGGGAACCCAGGCGCGGGGATTATGCGAATTGCCGGGGCTTGAGAAGCTCGCCGACGCGCCGCA
ATTTACCTTCAGCGAAATACGTCATGTCGGCCCGGATGTTTGCCTGCATATGGTGAGCGCATGA

Protein sequence :
MQDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHQRAGEPHAEVHALRMAGAKAKGATAYVTLEPCSHHGR
TPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIAVSHGLMMSEAEALNKGFLKRMRTGFPYLQLKLGASVDGR
TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWAELDASTQASYPQENLRQPVRIVIDSQNRVTP
AHRIVQQPGETWIARTQEDSRAWPDSVRTISVPAHNGHLDLVVLMMQLGRQQINSIWVEAGPGLAGALLQAGLVDELIVY
VAPKLLGTQARGLCELPGLEKLADAPQFTFSEIRHVGPDVCLHMVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-57 45
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-57 45