Gene Information

Name : fepD (SPUCDC_2360)
Accession : YP_008481972.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport protein FepD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2371204 - 2372211 bp
Length : 1008 bp
Strand : +
Note : -

DNA sequence :
ATGTCATGCTCGTTTTCCGTGACGCGCGCGTTTGCCGTGCCCGGATTGTTGTTATTACTGAGTCTCGCCGCGGTTTTAAG
CCTGGTCATTGGCGCGAAACCGCTGCCCGCCGCCGTCGTGCTGGAGGCGTTCACCGGCGTGTGCCAAAGCGCCGATTGCA
CCATCGTCCTGGATGCGCGTTTGCCGCGTACGCTGGCCGGATTACTGGCAGGCGGCGCGTTGGGCCTCGCCGGGGCGCTC
ATGCAAACACTTACTCGCAACCCGCTCGCCGACCCGGGGATTCTGGGCGTTAACAACGGCGCCAGCTTCGCCATTGTACT
GGGCGCGGCGCTGTTTGGTTTCTCCACGCCGCTGGAGCAGCTTTTCATGGCATTTAGCGGCGCGCTTATCGCATCGCTGA
TTGTCGCCTTCACCGGTAGTCAGGGCGGCGGCCAGTTAAGCCCGGTCCGCCTGACACTGGCGGGCGTGGCGCTTGGCGCG
GTACTGGAAGGATTGACCAGCGGCATCGCGCTGTTAAATCCAGAGGTCTATGATCAGCTTCGCTTCTGGCAGGCGGGATC
GCTGGACATTCGTAGCCTGCAAACGTTGAAAGTCGCGCTCGCGCCCGTGGTTATCGCTGGGATCGTGGCGCTATTTCTGA
GCCGAGCGCTGAACAGCCTGAGCCTCGGCAGCGATACCGCGACGGCGCTGGGGAGTAAAGTGGCGCGCACCCAACTTATC
GGTTTACTGGCGATTACCGTCTTGTGCGGCAGCGCAACGGCGCTGGTCGGCCCTATCGCCTTTATTGGTCTGATGATGCC
GCATATGGCGCGTTGGCTGGTGGGCGCAGACCACCGCTGGTCGCTGCCAGTGACGCTACTGGCCACCCCTGCTCTGCTGC
TTTTTGCCGATATTATTGGTCGTCTGTTGGTGCCGGGCGAACTCCGGGTATCGGTCGTCAGTGCGTTTATCGGCGCGCCG
GTACTTATCTTTCTGGTACGCCGTAAATCGAACGGAGGCGGCCTGTGA

Protein sequence :
MSCSFSVTRAFAVPGLLLLLSLAAVLSLVIGAKPLPAAVVLEAFTGVCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGILGVNNGASFAIVLGAALFGFSTPLEQLFMAFSGALIASLIVAFTGSQGGGQLSPVRLTLAGVALGA
VLEGLTSGIALLNPEVYDQLRFWQAGSLDIRSLQTLKVALAPVVIAGIVALFLSRALNSLSLGSDTATALGSKVARTQLI
GLLAITVLCGSATALVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRLLVPGELRVSVVSAFIGAP
VLIFLVRRKSNGGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-32 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-32 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-32 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_008481972.1 ferric enterobactin transport protein FepD VFG0926 Protein 7e-102 89